Rheinheimera sp. F8: ATY27_12860
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Entry
ATY27_12860 CDS
T09854
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhei
Rheinheimera sp. F8
Pathway
rhei00300
Lysine biosynthesis
rhei00470
D-Amino acid metabolism
rhei01100
Metabolic pathways
rhei01110
Biosynthesis of secondary metabolites
rhei01120
Microbial metabolism in diverse environments
rhei01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ATY27_12860
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ATY27_12860
Enzymes [BR:
rhei01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ATY27_12860
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Astro_capsid_p2
Motif
Other DBs
NCBI-ProteinID:
ALZ77983
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Position
2888460..2889662
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AA seq
400 aa
AA seq
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MTPFAHQQNDLLVGGKTAAQIAALLDAEVFYAYDRAAIKARVQSLRAALPARVKLHYAVK
ANPYFPVVHCLAAMVDGMDVASRRELVLALQSGVDATQISFAGPGKTDAELKAAIAAGCV
VHLESAGEMRRLQALCLQANASARVALRINPEFELRASGMKMAGGAKAFGIDQAQVWDLL
PELQTGPLQLVGFHLYCGSQNLQADAILQSQRQSLQLLMQLRPHCPQLQFFNLGGGFGVP
YFPADKPLDLTAVGAGMQQLFAEFAATVAGLEIILELGRYLVAHAGVYFSRVIDVKSSHG
QQFVVTNGGLHHHLANSGNFGQVVRRNYPVVLANKLTQAPAGPMQVVGPLCTPLDILADK
VALPEAVPGDWFAVLQSGAYGASASPQGFLSHGVVAEILL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
ctgacgccatttgctcaccaacaaaatgatttgctggtcggcggtaaaacagcggcgcaa
atcgcagcgttattggatgctgaagtgttttatgcatatgaccgtgctgccatcaaagcg
cgggtccagtcactgcgcgccgcgctgcctgcgcgggttaaattgcattatgccgtcaaa
gccaatccgtattttccggtggtgcactgcctggctgcaatggtcgatgggatggatgtg
gcatcacgacgggaactggtgctggcgctgcaaagtggtgttgatgcaacacagattagt
ttcgccgggcccggtaaaaccgatgctgaactcaaagctgcgatcgccgcaggctgtgta
gtgcatctggaatcggctggcgaaatgcgcaggctacaggctttgtgtttacaggccaat
gcttctgcccgtgtcgcgctgcggattaatccagaatttgaactgcgtgcttccgggatg
aaaatggccggtggtgccaaagcctttggtatcgatcaggcgcaggtctgggatttatta
cccgagctgcaaacaggtccgctgcagctggtcggttttcacttatattgtgggtcgcaa
aacctgcaggctgacgctattttacaaagccagcggcaaagcctgcagttattgatgcag
ctgcggccgcattgtccacaactgcagttttttaatctgggtggtggatttggtgtgcca
tatttcccggccgataagccactggacttaacagcagtgggcgcgggcatgcagcagtta
tttgctgaatttgccgccactgtagcagggcttgaaatcatccttgaactcggtcgctac
ctggtcgcccatgccggggtatattttagtcgggtcatcgatgtgaaaagctcgcatggt
cagcagtttgtggtcacgaacggtggtttgcatcatcatctggcaaattccggcaatttt
ggtcaggtggtacggcgcaattacccggtggtactggccaataaactgacccaggcaccg
gcgggaccaatgcaggtggtcgggcctttgtgtacgccactggatattttggctgacaaa
gtggcgttgccggaagcggtgcccggcgactggtttgctgtgttgcagtccggcgcttac
ggcgccagtgccagtccacaaggatttttgagtcatggtgttgtcgctgaaatactgttg
tga
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