Rheinheimera sp. F8: ATY27_14540
Help
Entry
ATY27_14540 CDS
T09854
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhei03032
]
ATY27_14540 (ihfB)
03036 Chromosome and associated proteins [BR:
rhei03036
]
ATY27_14540 (ihfB)
03400 DNA repair and recombination proteins [BR:
rhei03400
]
ATY27_14540 (ihfB)
DNA replication proteins [BR:
rhei03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATY27_14540 (ihfB)
Chromosome and associated proteins [BR:
rhei03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ATY27_14540 (ihfB)
DNA repair and recombination proteins [BR:
rhei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ATY27_14540 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALZ76856
LinkDB
All DBs
Position
3280967..3281251
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIEKLATDFPHIQVKDVESAVKEILEQMAGSLAVNERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRVKENT
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgagttgatcgaaaagttggccactgattttcctcacatccaggtaaaa
gacgtcgagtctgctgtgaaagagatcctggaacagatggcaggttcgctggctgtcaac
gaacgaattgaaatcagaggtttcggtagtttctcgctgcactacagagctccacgggta
ggtcgcaaccctaaaactggcgacaaagtagaacttgacggtaaatacgtcccgcatttt
aaaccaggtaaagaattacgcgaccgcgtgaaagaaaatacctga
DBGET
integrated database retrieval system
