Rheinheimera sp. F8: ATY27_15325
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Entry
ATY27_15325 CDS
T09854
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhei03000
]
ATY27_15325
Transcription factors [BR:
rhei03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ATY27_15325
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
HTH_5
HTH_20
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ALZ76993
UniProt:
A0A0U4NE36
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Position
3458199..3459173
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AA seq
324 aa
AA seq
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MNIRHLSFRLLQVYQAVVQTGSISQAARQLHLTQPTVSIQLKKLTEWAGEPLLESQHGTL
VPSPVGAELYRASQDVLGRFADFSQYVQSARAGNSGSLSLGIVTTAKYILPPLLAEFSRQ
FPQIELTLNIGNRAQILSRFEQQQDDLFLFSHPPAGNQVLARRLLKNPLQLIAPPGHWAA
GKPGLSMVDLKEERFLIREPGSATRMMLESWLSSQGLVLQKTMQIESNEAIRLSVASGLG
LAVLSAHTLQAGTEPVEQLQLPGLPLESHWYLVARRDRRLSATAAQLIRFLPAQLAQHLD
PGWLVSDLASLAADFLPDQFLSAN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgccatttgagttttcggctgttgcaggtctatcaggctgtggtgcaaacc
ggcagcatctcgcaggccgcccgtcagttgcatctgacccaaccaacagtgtctatccaa
ttaaaaaaactgaccgagtgggccggcgaacctttattggaaagtcaacatggcacgctg
gtgccgagcccggttggcgctgagctataccgcgccagtcaggatgttctgggccgcttt
gccgatttttctcagtatgtgcaaagtgcgcgcgccggcaatagtggcagtctgagcctg
gggattgtcactaccgccaaatatattctgccaccgctgttggccgaattttcccgccag
tttccgcaaattgaactgacgttaaatattggcaaccgcgcccagatcctcagccgcttt
gaacagcagcaggatgacctgtttttattcagccacccgccggccggaaatcaggtatta
gcccggcgcctgttaaaaaacccgctgcaactgatagccccgcccggccattgggcggcc
ggcaaacccgggcttagtatggtggatttgaaagaagaacgttttctgatccgcgagccc
ggctccgccacccggatgatgctggaaagctggctgagcagtcagggactggtgctacaa
aaaactatgcaaattgagagcaacgaagcgatccgtttaagtgtcgcctcgggcctgggt
ttggccgtcttgtcagcacacacactacaggctggcaccgaaccggtcgaacagttacag
ctgccgggtttgccactggaaagtcattggtatctggtggcgcgccgcgatcggcgttta
tccgccaccgcagcacagctaattcgttttttgccggcgcagctagctcaacacttggac
ccgggctggctggtcagcgatttagccagcctggccgcagactttttgccagaccaattt
ttgtcagccaactga
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