Rheinheimera sp. F8: ATY27_16160
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Entry
ATY27_16160 CDS
T09854
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhei03009
]
ATY27_16160
Enzymes [BR:
rhei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ATY27_16160
Ribosome biogenesis [BR:
rhei03009
]
Prokaryotic type
rRNA helicases
ATY27_16160
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Ortholog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALZ78035
UniProt:
A0A0U4W7H1
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Position
3645812..3647041
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AA seq
409 aa
AA seq
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MLRFADFDLDPALARALTEASFEKPTTIQQQAIPVGLEGRDILASAPTGTGKTLAFLLPA
LQYLIDFPRREPGFARALIMTPTRELAFQIFEQLQILTKHTTLNCGVITGGINYGSHKDT
LEKNNDILVATPGRLIEYMNEESFQADEVEVLILDEADRMLDMGFVAEMDRIISDAKRRR
QTMLFSATLEGVAIERFAKRALKEPVTVEAESPRREKAKIQQWIHLADDADHKLALLTHL
LQQPEMTKVIVFIKTRERLASLAGQLESVGLKTCWLQGEMPQDKRLLAVSRFSKGLVRIL
LATDVAARGLDIDDISHVINFDMPRTADVYVHRIGRTGRAGKKGIAISLVEAHDIDMVGK
VERYTETALKRRVIESLRPKHKEAKPSTKTKKPKSVAKKKALKKAAKAK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atcctccgttttgctgattttgatctggaccctgcgctggcccgcgctttaactgaagcc
agttttgaaaaaccgactacgattcagcaacaggccattccggttggccttgaaggccgc
gacattctggccagcgcgccgaccgggactggcaagaccctggcgtttttattaccagcc
ctgcaatacctgattgatttcccgcgccgtgaaccgggttttgcccgtgcgctgatcatg
acgccaacccgcgagctggcctttcagatctttgaacaactgcaaattctgaccaaacac
accacactgaattgcggcgtgatcaccggcggcataaactacggcagccacaaagatacg
ctggaaaaaaataacgatattctggtcgcgacgcctggccggctgatcgagtatatgaac
gaagaaagcttccaggccgacgaagtggaagtgttgatcctcgacgaagccgaccggatg
ctggacatgggctttgtcgccgagatggatcgcatcatcagcgacgccaaacgccgccgc
cagaccatgctgttttctgcgacgctggaaggcgtggcgattgaacgttttgccaaacgc
gcactaaaagagccggttaccgttgaagccgagtcgccacgccgggaaaaagccaaaatc
cagcaatggatccacctggccgacgacgcggatcacaagctcgccctgttgacgcattta
ttacagcaaccggaaatgactaaagtcattgtgtttatcaaaacccgcgaacgcctggcc
agccttgccggccaactggaatccgtcggtttaaaaacctgctggttacaaggcgaaatg
ccgcaggacaaacgcctgctggccgtatcgcgttttagcaaagggctggtgcggatttta
ctggcaactgacgtggccgcgcgtggcctcgatatcgatgacatcagccatgtgatcaac
tttgatatgccccgcaccgccgatgtgtatgtgcaccgcattggccgtaccggccgtgcc
ggcaaaaaaggcatcgcgatctctctggttgaagcccatgacattgatatggtcggtaaa
gtcgagcgctacaccgagaccgcactgaaacgccgcgtgattgaaagcctgcggccaaaa
cacaaagaagccaaaccttcgaccaaaactaaaaaaccaaaatcagtcgcgaagaaaaag
gcgttgaaaaaagctgccaaagccaaataa
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