Rheinheimera sp. F8: ATY27_17555
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Entry
ATY27_17555 CDS
T09854
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
rhei
Rheinheimera sp. F8
Pathway
rhei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ATY27_17555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhei03021
]
ATY27_17555
Transcription machinery [BR:
rhei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATY27_17555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ALZ77388
LinkDB
All DBs
Position
3974798..3976651
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AA seq
617 aa
AA seq
DB search
MEQNPQSQLKLLILKGKEQGYLTFAEVNDHLPQDIIDSDQIEDIIRMINDMGIQVCETAP
DADDLIMSDAAPDEDAAEEAAQALVSVDKELGRTTDPVRMYMREMGTVELLTREGEIDIA
KRIEDGINQVQTSVAEYPEAITYLLEQWDKFEAEEIRLSDIVTAFVDPNEVDDLPPTATH
IGSDVPEEELADEDADITADDEESEDGESDEADTGPDPELAREKFGELRIQYDITRKSII
ENGREHAQTKAEIDKLSEVFRCFRLVPKQFDRLVKNMREMMDRVRVQERIVMKHCVEYAK
MPKKNFLKSFTGNENSSAWIDAEIAANKPYSAKLADMREELVRSTDKLRKIEEETGLSIF
KIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAV
DKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGR
EPSPEELSERMGMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDNSSESPLDSAT
MESLKAATNEVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALR
KLRHPSRSEVLKSFLDE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaatcctcagtcgcaattaaagcttcttatcttaaaaggtaaggaacaaggt
tatttaacttttgctgaagtaaacgatcaccttccacaagatatcatcgactctgaccag
atcgaagatattattcgcatgatcaatgacatgggcatccaggtctgcgaaacagctcca
gatgctgacgatttgattatgtcagacgcagcaccggatgaagacgctgcggaagaagcc
gcgcaagcgctggtcagtgtggacaaagaattgggccgcaccacggatccagttcggatg
tacatgcgcgaaatgggtacggtagaactgttgacccgcgaaggcgaaattgacatcgct
aaacgcatcgaagacggcatcaatcaggtgcaaacgtcggtcgcagaatacccggaagcc
attacttacctgctggaacagtgggacaaatttgaagccgaagaaattcgtttaagcgac
attgtcaccgctttcgttgatccaaacgaagtcgatgatctgccgccgacagcgacgcat
atcggttctgatgtgccggaagaagaactggccgacgaagatgctgatatcaccgccgac
gatgaagaaagcgaagacggtgaatccgatgaagcggatacaggtccggatccggagctg
gcacgcgaaaaattcggtgaattgcggatccaatacgatatcacccgcaaatctattatc
gaaaacggtcgtgaacacgcgcagaccaaggcggaaatcgacaagttgtctgaagttttc
cgttgcttccgtttagtaccgaagcaatttgaccgcttggtcaaaaacatgcgcgaaatg
atggaccgtgtgcgtgtgcaggaacgtatcgtcatgaagcattgcgttgaatacgccaaa
atgccgaagaagaacttccttaaatccttcactggcaacgaaaacagcagtgcctggatc
gacgctgaaatcgccgcgaataaaccatattcagccaagttggcagatatgcgcgaagag
ctggtgcgttcaacggacaagctgcgcaaaatcgaagaagaaaccggtctgtcgattttc
aaaatcaaagacatcaaccgtcgcatgtccatcggtgaagcaaaagcccgccgtgcgaaa
aaagagatggtggaagccaacttacgtctggtcatttcgattgcgaaaaaatacaccaac
cgtggtcttcaattccttgatttgattcaggaaggtaacatcggcttgatgaaagcagtc
gataaattcgaatatcgccgtggttataagttttcaacttatgccacctggtggatccgt
caggcgattacccgttctatcgcggaccaggcccggaccatccggatcccggtacatatg
atcgaaaccatcaacaaacttaaccggatctcccggcagatgttgcaggaaatgggtcgt
gaaccatcaccggaagaactgtctgaacgcatgggcatgccggaagataagatccgcaag
gtgctgaaaatcgctaaagagccgatttcgatggaaacaccgattggcgacgatgaagat
tcgcatctgggtgattttattgaagacaattcctcagaatcgccactggattcagccaca
atggaaagcctgaaagccgctaccaatgaagttctggctggcctgaccgctcgtgaagcg
aaagtattgcggatgcgttttggtattgatatgaacaccgaccataccctggaagaagtg
ggcaaacaatttgacgttacgcgtgagcggatccgtcagattgaagccaaagcgctgcgc
aagctgcgtcacccttcccgctcagaagtgctgaaaagcttcctggacgaataa
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