Rheinheimera sp. F8: ATY27_19470
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Entry
ATY27_19470 CDS
T09854
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhei03400
]
ATY27_19470
Enzymes [BR:
rhei01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ATY27_19470
DNA repair and recombination proteins [BR:
rhei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ATY27_19470
Prokaryotic type
ATY27_19470
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALZ78089
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All DBs
Position
4423532..4425043
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AA seq
503 aa
AA seq
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MTLVWFKRDLRIDDHEPLVRALQQGAVLPLYIIEPDYWQQPDTSVRQWQFVRDAVYGLHQ
QLSQLGQPLLVRRGPATRVLRELCREFPLQQVVSHQETGNLWTYQRDEAVGKLLRELGLP
WQQYSQHAVKRRLQHRDQWFEQADAFLRSPYVATPNALPFLTAAPWQEALWQAPQRRELP
PVVQIQQAHALQPTLDSFWQFRSKHYQRDISIAARAGQSCSRLSPYLSAGQLSLRQLQQH
TYLQMKQQTDPRQQQALAAFFSRLRWHCHFMQKLEDEPRIEFSPMQPLYQGMRDQFEPAL
FQAWQRGETGYPLIDAAMRCLVATGWLHFRARAMLVSFASYQLWLDWRPVALHLARCFTD
YEPGIHYPQIQMQAGTTSINPNRMYNPLKQSLTKDPQGHFIRQWCPELARLPNDWLHQPW
LLPATLQRHYQWVPGRDYPLPIVDLVQATRLARSRLTQWHSQYDKQVWQQGREVVRERHA
SRKRPPERRPSKTAPAPQLTLDF
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ctgacgctggtctggtttaaacgtgatctgcggattgacgatcatgaacctttggtacgc
gcgctgcagcaaggcgcggttttaccgctttacattattgaaccggattattggcagcaa
cctgacacttcggtgcgccaatggcaatttgtgcgcgatgccgtctatggcttacatcag
cagctgagccaactgggccaacctttgctggtgcgacgcgggccagccacgcgggtgctg
cgcgagctgtgccgggaattcccgctgcaacaagtggtcagtcatcaggaaaccggcaat
ctgtggacttatcagcgtgacgaagcggtcggcaaactgctgcgggaacttgggttgcct
tggcagcaatatagtcagcatgcggttaaacggcgtctgcagcatcgcgatcaatggttt
gagcaggccgatgcgtttttacgtagtccctatgttgccactccgaatgcgttgcccttt
ttgactgcggccccgtggcaagaggcattgtggcaggcaccgcagcgccgagaattaccg
ccggtcgtgcagatccagcaagcgcatgcattgcaaccgacactggattcgttctggcag
tttcggagtaaacattatcagcgtgatatctcaattgcggcgcgggccggccagagttgt
tccaggctcagtccttatctgagcgccggtcagctcagtctgcgccagctgcagcaacac
acttatctgcaaatgaaacaacaaaccgatccgcgacaacagcaggccctggcggccttt
ttcagccggctgcgctggcattgtcattttatgcagaaactggaagatgaaccgcgcatt
gaattttcaccaatgcagccgctgtatcaggggatgcgtgaccagtttgaaccggcgttg
tttcaggcctggcaacgcggtgaaaccggttatccgctgatcgatgcggcgatgcgttgt
ctggtcgcaaccggctggctgcattttcgggcacgggcgatgttggtgtcgtttgccagc
taccagctgtggctggactggcgcccggtggccttgcatctggcccgttgctttaccgac
tacgaacccggcatccactatccccaaatccagatgcaggctggtaccacgtcaatcaat
ccgaaccggatgtataacccgctgaaacaaagcctgacgaaagacccacaaggtcatttt
atccgccagtggtgtccggaactggcgcgcttgccgaatgactggttgcaccagccctgg
ttattgcccgcaacattacaacgacactatcaatgggtgccggggcgcgactatccctta
cctatcgtcgatttagttcaggcgacccggctggcgcgcagccggctgacgcaatggcac
agccaatatgacaaacaagtctggcaacaaggccgcgaagttgtgcgggaacgccatgca
agccgcaaacggccgccagaacgccgcccgtctaaaactgcaccggcgcctcagttaacg
ttggatttctga
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