Ruminiclostridium herbifermentans: EHE19_001340
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Entry
EHE19_001340 CDS
T07161
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EHE19_001340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_001340
Enzymes [BR:
rher01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EHE19_001340
DNA repair and recombination proteins [BR:
rher03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EHE19_001340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_2
HHH_5
HHH_8
AlkA_N
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QNU68694
UniProt:
A0A4U7JGY5
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All DBs
Position
313476..314363
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AA seq
295 aa
AA seq
DB search
MEYKGYSINCKNGIMAIEGVKDFNLTHIFECGQCFRWIRQQDGSYNGIVKDKFVNVSLSN
GILYIRNAEEQNFIDIWYEYFDLGTDYSKIKSVLEKDEIMKEAIKTGYGIRLLRQDFWEM
LISFIISANNMIPRIMKTVDTLSVLKGGCIEANYNAYRFPEIHDLANATLEEIQQCKAGF
RCKYIHQTSKLMYQEAITKEMLQSLDTDMARKELMKLPGVGPKVADCILLFSGIKFDVFP
TDVWVKRVMEELYLKKESKLNEIQSFAKNQFGNLTGYAQQYLFYHARLNRIGMGK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggagtataaaggctattcaatcaattgtaagaatggaattatggcaatagagggcgtt
aaggattttaacttgacacatatatttgagtgcggacagtgctttagatggattaggcag
caggatggaagttataatggaattgttaaggataagtttgtaaacgtaagcttaagcaat
gggattttatatattagaaatgcggaagaacagaattttatagatatctggtatgaatat
tttgatttgggaacggattactcaaaaattaagtctgtgcttgagaaggatgaaattatg
aaggaggctatcaaaacaggctatggtatcagattgctcagacaggatttctgggaaatg
cttatttcctttattatatccgcaaataatatgataccaagaataatgaaaactgtagat
actctttctgtgttaaaaggcggatgtatagaagccaactataatgcatatagatttcct
gaaattcatgacctcgctaatgctactttagaagagattcaacagtgcaaagcggggttt
aggtgtaaatatattcatcaaacttctaagcttatgtatcaagaggctataaccaaagag
atgcttcaatccttagacactgatatggctagaaaagagttgatgaaacttccaggagta
ggcccgaaggttgcggattgcatattacttttcagtggtattaaatttgatgtgtttccc
actgatgtatgggtgaaacgtgttatggaagaactttatttaaagaaagaatctaagcta
aacgagatacaaagcttcgctaaaaaccagtttgggaatttgactggctatgcacagcaa
tacttattttaccatgcaagattaaacagaattgggatgggtaaatag
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