Ruminiclostridium herbifermentans: EHE19_003590
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Entry
EHE19_003590 CDS
T07161
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher02010
ABC transporters
rher03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EHE19_003590
03070 Bacterial secretion system
EHE19_003590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rher02000
]
EHE19_003590
02044 Secretion system [BR:
rher02044
]
EHE19_003590
Transporters [BR:
rher02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EHE19_003590
Secretion system [BR:
rher02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EHE19_003590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
Ig_TMEM131_2
ABC_ATPase
AAA_29
nSTAND3
KAP_NTPase
AAA_18
DUF87
NB-ARC
MeaB
Motif
Other DBs
NCBI-ProteinID:
QNU68732
UniProt:
A0A4U7JFS9
LinkDB
All DBs
Position
809146..811323
Genome browser
AA seq
725 aa
AA seq
DB search
MGQNSKGNKIEENEGYEEKEKRVDSGLYCFITIARFNRVNADPEQIKHSLAIGADGMQEL
DILRAAKELGLKAKAAIVNLKKLQKLPLPAIAENNQGEFFIVAKIEGDKVLTLFAGENSP
RAMHVEEFNKIWNRKILLFVNRSIKELNRKFGIKWFIPTILKFKKPLIEVLVAVFTLQIF
GLFSPIITQVVIDKVFVHNGITTLNVLAIGLIIIAVFETVMGIAKSYIFTHTTSRIDIIL
GVRLVRHLFRLPLRYFETRRVGDTIARVREQENIRHFLTGAPLTSVLDILFLIVYISVML
FYSTNLTFIVLASLPVFVALSAFITPLFKKRLDEKFNTGAEQQSFLVESVSGVQTIKSFA
LEPVMQNRWEGLLANYTKASFKTSLLSANAGAIGQLIQKSTDIAVLWYGAHLVMQGTITV
GQLIAFRMLSGRVSGPVLRFVQLWQDFQQAGLSIKRLGDIFNTVPEQSIDASKSRLPAIN
GRITFEKVRFRYRVDSSEVIRDMSFDIKPGTVVGIVGRSGSGKSTISKLIQRLYIPEAGK
ILIDGVDIALTDTAWLRRQIGVVLQENFMFNMTIRENISIHNPTASMADIIRVAKIAGAH
DFILELPEAYDTMVGEKGTGLSGGQKQRIAIARALLNNPRILIFDEATSALDYESESIIQ
KNLKTICKGRTVIIIAHRLSTLKDADKIMAIDKGQLIEYGEQEKLLQRKGLYYYLHSQQE
RGDVC
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaattcaaaaggtaataaaatagaagaaaatgaaggttatgaagaaaaagag
aaacgtgttgattctggattatattgctttattactatagcaaggtttaatagagtaaat
gcagaccctgagcaaattaagcattcattagcaataggagctgatggaatgcaggaactt
gatatacttcgagcagctaaagagttaggactaaaagctaaagcagcgatagtgaatttg
aaaaaacttcagaagttacctctgcctgcaatagcagagaataatcaaggtgagtttttt
attgtagctaaaatagaaggagataaagtactaacactatttgctggagaaaattctccg
agggctatgcatgtggaagaatttaataaaatttggaacagaaaaatattactatttgta
aataggagcattaaagagctaaatcgtaaatttggcattaagtggtttataccaacaata
ttaaaattcaaaaaacctttaatagaagttcttgtagcagtatttacattacagattttt
ggacttttctcacctataataacgcaggtcgtaatagataaagtatttgtacataatggt
attaccacactaaatgttcttgctattggattgattataatagctgtgtttgagacagtg
atgggtatagctaaaagctatatatttacgcatactacaagcaggatagatataattcta
ggtgttaggctagttagacatttgttcaggctacctctcagatattttgaaacaagaaga
gttggagatacaatagcaagagtaagagaacaggaaaatattagacattttcttacagga
gcacctctgacatcggttttagatattctattcttaattgtatatattagtgttatgtta
ttttatagtactaatcttacctttattgtattggcatcacttcctgtttttgttgcatta
tcagcatttataacacctctgttcaaaaaaagattagatgaaaaattcaatacaggtgca
gagcagcagtcgtttttagtggaaagtgtttcaggtgtacaaacgataaaatcatttgca
cttgagcctgtaatgcaaaacagatgggaagggctactagcaaactatacaaaggcaagt
tttaagacttctttactttcagctaatgcaggtgctattggtcaattgattcagaaaagt
actgatattgcagttttatggtatggcgcacatcttgtaatgcagggaaccattactgtt
ggtcagctaatagctttcagaatgttatctggtagagtaagcggaccagtgcttcgtttt
gtacagctatggcaagattttcagcaggcaggactatcaataaaaagattaggcgatata
tttaataccgtacctgaacaatctattgatgcctctaaatcaaggttaccagcaatcaat
ggacgcataacattcgaaaaggtacgctttaggtatagagttgatagttcagaagttata
agagatatgtcctttgatataaagcccggtacagttgtaggaattgtaggaagaagtggc
tctggtaaaagtactatatcaaaactaattcaaaggctatatatccctgaggcaggtaaa
atattgattgatggagtagatatagcacttactgatactgcatggctaagaaggcagata
ggagttgttttgcaagagaatttcatgtttaacatgactatcagagaaaatattagcata
cacaatcctactgcaagtatggcagatataatacgagttgcaaaaattgcaggagcgcac
gattttatacttgaactacccgaagcatatgacacaatggtaggagagaaaggaactggt
ctttctgggggacagaaacaacgaatagcaatagcaagagcattgttgaataatcctaga
attctaatatttgatgaagctacatccgctttagactatgaatcagaaagtataattcaa
aaaaatctaaaaactatttgtaaaggtagaacagttattataattgcgcatagactctca
actttaaaagatgcagataagattatggcaattgacaaaggtcagcttattgaatatgga
gaacaagaaaaacttttacagagaaaagggttatactattatttacacagtcagcaagag
agaggtgatgtatgttga
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