Ruminiclostridium herbifermentans: EHE19_003735
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Entry
EHE19_003735 CDS
T07161
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rher03021
]
EHE19_003735
Transcription machinery [BR:
rher03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHE19_003735
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_17
HTH_23
HTH_28
HTH_10
HTH_37
HTH_Tnp_4
MarR
KORA
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QNU67601
UniProt:
A0A4U7JFR8
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All DBs
Position
846939..847685
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AA seq
248 aa
AA seq
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MEQNNRNVAMMEDEELFTLYSNTNDIKYRNEIVSKYLNLAEYLSKKFINRGVDFEDIYQV
ACLALINAVDRFSLDKGVKFVSFATPTILGEIKRFFRDKSSSIKIPRRLYEARQGLNKAR
DELTQQYGRVPKADEIAAYMGISVETVLELIEAGSSTIIKSLDQNIYQDNDAELGDTLGY
DEKTYEKIENRDFIEKALNMFGELEREFITLRYIQNYTQKQIAEIFGVSQMYVSRMEKKI
LDKFRTLL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaataatagaaacgttgctatgatggaggatgaagaactgtttacgctgtat
tccaatacaaatgacattaaatacagaaatgaaattgtatcaaaatatttgaaccttgct
gaatacttatcaaaaaaatttattaatagaggtgttgatttcgaagatatatatcaagtt
gcttgtttggcattaataaatgctgtagatagatttagcctggataaaggagtcaagttt
gttagttttgcaactcctacaatacttggagaaataaagaggttttttagggacaagagt
tcatcaataaagattccaagaaggctttatgaagctagacaaggactaaataaggcaaga
gatgaattgacgcaacaatatggtagggttccaaaagcagacgaaatagcagcatatatg
ggaataagtgtagaaacagttttagaattgattgaagctggaagttcaactataattaag
tctttagatcaaaatatataccaagataacgatgctgaacttggtgataccttaggatac
gatgaaaaaacatatgagaaaattgaaaatagagattttattgaaaaagccttgaacatg
tttggagaactagaaagagagtttattacattaagatatattcagaactatactcaaaaa
caaattgctgaaatatttggagtttctcaaatgtatgtatcaagaatggaaaaaaagatt
cttgataagtttagaaccttactataa
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