Ruminiclostridium herbifermentans: EHE19_004250
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Entry
EHE19_004250 CDS
T07161
Name
(GenBank) TetM/TetW/TetO/TetS family tetracycline resistance ribosomal protection protein
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
rher01504
]
EHE19_004250
Antimicrobial resistance genes [BR:
rher01504
]
Gene variants
Tetracycline resistance genes
Others
EHE19_004250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NYN_YacP
GTP_EFTU
EFG_IV
EFG_C
EF-G_D2
EFG_III
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D2
FeoB_N
Polysacc_deac_1
RF3_C
Phage_tail_terminator_7
bPH_3
Motif
Other DBs
NCBI-ProteinID:
QNU67690
UniProt:
A0A4U7JDK2
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All DBs
Position
953277..955928
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AA seq
883 aa
AA seq
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MEKLVIGILAHVDAGKTTLSESLLYLNGKIGKLGRVDNKDAYLDTFELEKARGITIFSKQ
ALFEIGNIQITLLDTPGHVDFSAEMERTLQVLDYAILVISGADGVQSHTKTLWSLLKKYQ
IPVFIFVNKMDQSGTDKEKLIKELKKQLDEGCIEFEQAEAEDYYEQLAMCDETLMEAYLN
IGFLETELIKKAIKNRKVYPCFFGSALRLQGVEEFMHGIELYTVIPEYPHEFGAKVFKIT
RDNQGSRLTYMKITGGSLKVKDVLTNGTWEEKVNQIRVYSGHKYEAVSEIGAGSICAVTG
LTQTMPGEGLGIEEASSAPELEPVLFYRIILPEGCDPRVMIPKLRQIEEEEPELHIVWDE
QLQEIQVQIMGEVQLEILQSQIQSRFGVSVTFDQGRVVYKETILNTVEGVGHFEPLRHYA
EVHLLLEPGEPGSGLIFGTDCSEDLLSKNWQRLILTHLREKTHRGVLTGSAITDMKITLV
SGRAHNKHTEGGDFREATYRAVRQGLKQAESRLLEPYYSFQLELPEKMVGRAMADIEKMH
GTCEITQSDGNTAVLEGSAPVTTMKNYQMEVVAYTKGLGRLFCSLKGYGQCHNEAEVIEL
IGYDSERDIGNPTSSVFCSNGAGFIVDWDKVKDYMHVESYFSKKEDTEETTKKIASYVEE
QWISPDEIGQIFNKTFYANQGKRSTWKRRKVSSRSYDEPSRVTYVAKQKEFEEEYLLVDG
YNIIYAWDELKELADKDMDIARIKLLDILSNYQGIRKCEIIVVFDAYRVSGHQEEVMDYH
NIHMVFTKEAQTADQYIEKFTYDNKKKYKITVATSDGLQQIIIRGAGGALLSARELKADV
EMANMKMMQQHQEMQEVNRKFLRNTLSQEAKQQMKKMFEEAEE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattagttattggaatattagcacatgtagatgcaggaaaaacaacattatca
gagagtttgctttatctaaacggtaaaataggaaaattgggcagagtggacaacaaggat
gcttatttagatacctttgaattggaaaaggcaagaggaatcactattttctccaagcag
gctctttttgaaatagggaatatacagattaccttactggatactccaggacatgtagac
ttttcagcagaaatggaaagaacacttcaggttcttgattatgctattttagtaataagc
ggtgcagacggagttcagagccatacaaagacattgtggagtctgcttaaaaagtatcag
attcctgtttttatatttgtaaataaaatggatcaaagtgggacagataaggaaaagtta
ataaaagaactaaaaaagcagcttgacgaaggttgtattgaatttgaacaagctgaggct
gaagattattatgaacaattggcaatgtgtgatgaaacccttatggaggcatatttaaat
atagggtttctagaaacagagttaattaaaaaagctatcaagaatcgaaaagtatatccg
tgtttttttggttctgctttaaggctgcaaggagtagaagaatttatgcatggtatagaa
ttgtataccgtgattcctgaatatccccatgaatttggtgctaaggtatttaaaataaca
agggataatcaaggcagccgtctgacgtatatgaagattactggtggaagtctaaaggtt
aaggatgtcttaaccaatggaacttgggaagaaaaagtaaatcaaattcgtgtctattca
ggacataaatacgaggcggttagtgaaattggggcaggctctatatgcgccgtaacagga
cttacccaaacaatgccgggagaaggactagggatagaggaggcttcatctgcaccagaa
ttagaacctgttttattttatcgaattatacttccagaaggctgtgacccaagagtaatg
attcctaaactgcgtcaaattgaagaggaagaaccagaacttcatattgtatgggatgag
cagctgcaggaaatccaagtgcagataatgggagaagtacagcttgaaattctccagagc
cagatacaaagtcgatttggtgtttctgtgacatttgatcaaggaagggttgtttataaa
gagaccatactaaatacagttgaaggagtagggcattttgaacctttgaggcattatgca
gaggttcacctgttgttagaaccgggtgagccaggaagtgggctgatttttgggacagat
tgcagcgaggatttgcttagtaaaaactggcagaggcttattttaactcatttgagagaa
aagactcatagaggagttttaacaggctcagccattacagacatgaaaattactttagta
tcgggcagagcgcataataagcatactgaaggcggtgacttcagagaggctacctaccgt
gcagtacgacagggtcttaagcaggcagagtcaagattacttgagccatattattcattt
cagttggaattacctgagaaaatggttggaagagcaatggcagatattgagaagatgcat
ggaacatgtgaaataacacagtcagatgggaatacggctgttcttgagggaagtgctccc
gttactaccatgaaaaattaccagatggaggtagttgcttatacaaaaggccttggcagg
ctattttgcagccttaaaggatacggacaatgccataatgaagcagaagtcattgaactt
attggatatgattcagaaagagatatcggtaatcccaccagttctgtattttgttcaaac
ggcgcaggatttatagtggattgggataaagttaaagattatatgcatgttgaaagctat
tttagtaaaaaagaagatacggaagaaacaactaaaaaaatagcttcatacgtagaagaa
cagtggattagtccagatgaaattgggcaaatttttaataaaacattttatgcaaaccaa
ggaaagcgatctacttggaaaagacgcaaagtatccagcagaagttatgatgaaccttcg
agagttacttacgttgcaaaacaaaaagaatttgaagaagagtatctccttgtggatgga
tataatattatctatgcatgggacgaactaaaggaacttgctgataaagatatggatatt
gccagaattaagctgcttgatattctaagtaattatcagggaattcggaaatgtgagatt
atagttgtatttgatgcttatcgtgtttcgggtcatcaagaagaagtaatggattatcat
aatatccatatggtatttactaaggaggcgcaaacagcagaccagtacatcgagaaattt
acctatgacaataagaaaaaatataaaataacagttgccacctctgatggattacagcag
attattattaggggagctggaggggctttactgtctgccagagaactaaaagctgatgta
gaaatggctaatatgaaaatgatgcagcagcatcaggagatgcaggaagtaaatcgcaaa
tttttaagaaataccttgtctcaagaagcaaaacagcagatgaaaaaaatgtttgaggaa
gcagaagaatag
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