Ruminiclostridium herbifermentans: EHE19_004575
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Entry
EHE19_004575 CDS
T07161
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00061
Fatty acid biosynthesis
rher00071
Fatty acid degradation
rher01100
Metabolic pathways
rher01212
Fatty acid metabolism
rher02024
Quorum sensing
rher04146
Peroxisome
Module
rher_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EHE19_004575
00071 Fatty acid degradation
EHE19_004575
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EHE19_004575
09145 Cellular community - prokaryotes
02024 Quorum sensing
EHE19_004575
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rher01004
]
EHE19_004575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rher04147
]
EHE19_004575
Enzymes [BR:
rher01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EHE19_004575
Lipid biosynthesis proteins [BR:
rher01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EHE19_004575
Exosome [BR:
rher04147
]
Exosomal proteins
Exosomal proteins of breast milk
EHE19_004575
Exosomal proteins of breast cancer cells
EHE19_004575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PcrB
Motif
Other DBs
NCBI-ProteinID:
QNU67744
UniProt:
A0A4U7JEV0
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All DBs
Position
1041564..1043273
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AA seq
569 aa
AA seq
DB search
MKNIPLYEVRKISDLKDMIEQSTKLYGPKPAFLVKENGNPNYIPVSYNKFKSDIDALGTA
LISLGLKGKRIAIIGENRYEWSTSYLGVCNGTGIVVPLDRELPHNEIESCIQRSYADAII
FSGSVSSKIENIIKNIGTCKYFINMDLEEDSDGQLSYSKLLKKGHELVAAGNREFLDAEI
DNEAMSILLFTSGTTEKSKAVMLSHKNITANLMAMCSMLYIDEKDTFLSVLPPHHTYECT
CGFLCQMYRGCTIAYCEGLRHIVKNLRESKCTVMNGVPLIFESIYKQLINNVKKRPGAEK
KLKFGIKLSNILSLLKIDIKRKLFAEIHEALGGHLRLFISGAAAINPVVPKGFKDIGIKL
VQGYGLTECAPIVALNRDCWFKFDAAGLPLPGLKVAIDNPNSEGIGEIKVSGPSVMLGYY
ENQEATDAVIRDGWFYTGDMGYFDEDGFIHITGRMKNMILTKNGKNVYPEEIETLLGRSD
YIKESLVYGQEGKDDVVVCAKIVPDKEKIAEDIKDGIIPEQDIYDIINSEIKRINKELVN
YKAVKEFTLRDEEFEKTTTKKIKRYQELK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatacccttgtatgaggtaagaaaaatttcagacttaaaagatatgatagaa
caaagcaccaagctatatggtccaaagcctgctttcttagttaaggagaacggcaatccc
aattatatccctgtatcttacaacaagtttaagtcagatatagatgctttgggtacagca
ttaattagcttgggattgaagggtaaaaggattgcaataattggtgaaaacagatacgaa
tggtcaacgtcatatttaggagtttgtaatggtactggtattgttgttccattggataga
gaacttccgcataatgaaattgaaagctgcatacagagaagctatgctgatgccataatt
ttttctggttctgtctcatcaaaaattgaaaatataattaagaacattggtacttgtaaa
tattttattaatatggacttagaagaggattctgatggacagctttcttacagtaaattg
cttaagaaaggccatgaattagttgctgcaggcaatagagaattccttgatgcagaaatt
gataatgaagctatgagtatcctattatttacatcaggaacaacagaaaaatcaaaggca
gttatgctttcacataaaaatattactgctaatctaatggcaatgtgctctatgctgtat
atagacgaaaaggataccttcctatccgtattgcctcctcatcatacctatgaatgtacc
tgcggttttctctgccaaatgtacagaggctgtacaattgcttattgtgaaggacttaga
catattgtcaaaaaccttagagaatcaaaatgtaccgttatgaatggggttccattgatt
tttgaatctatttacaagcagctcataaataatgtgaaaaagaggccaggagctgagaaa
aaactaaagtttggcattaaattgagcaatattttaagtctattaaaaattgatataaaa
agaaaactatttgctgagattcatgaagccctgggaggacatttaagactatttattagt
ggagcagcagcaattaatccagtagtgccaaagggatttaaggatattggaataaagctt
gtacaaggctatggattaacagaatgtgcaccgatagttgcattaaatagagattgctgg
ttcaagtttgatgcggcaggccttcctttgcctggattaaaggtggctatagacaatcct
aactcagaaggaattggagaaattaaagtatcaggacctagtgttatgttaggatattat
gagaatcaggaagcaacagatgccgttattagggacggatggttttatactggtgatatg
ggttattttgatgaggatggatttattcatatcacaggaagaatgaaaaatatgatttta
actaagaacggcaaaaatgtatatcctgaagaaatagaaactcttttaggccgaagtgat
tatattaaagagtctttggtatatgggcaggagggcaaggatgatgtggttgtctgtgct
aaaatagttcctgacaaagaaaagattgctgaagatattaaggatggaataattccagag
caagatatatatgatattatcaattctgaaattaaaagaataaataaagaattggttaac
tataaggctgtaaaggaatttacgctaagagatgaagagtttgaaaaaacaacaacaaag
aaaattaagaggtatcaagaattaaaatga
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