Ruminiclostridium herbifermentans: EHE19_005200
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Entry
EHE19_005200 CDS
T07161
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rher03019
]
EHE19_005200 (rapZ)
Messenger RNA biogenesis [BR:
rher03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EHE19_005200 (rapZ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
CoaE
AAA_22
SKI
Motif
Other DBs
NCBI-ProteinID:
QNU67849
UniProt:
A0A4V6ENH9
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All DBs
Position
1188377..1189252
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AA seq
291 aa
AA seq
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MRFVIVTGMSGAGKSLVTKYLEDIGFFCVDNLPPSLILKFAEISAQSEGKMEKIALVIDI
RGGELLHDLFPALDEIQQSGFSYEILFLEADDDVLVKRYKESRRQHPLSQEGRLLKGIKE
ERKALEKIKAKANYIIDTSTLATRQLKQEINNIFLEGKTFTGIIINIVSFGFKYGIPTDC
DLVFDVRFIPNPYYIAPMKLKTGKDEMVKEFVLNAPETKEFLGKLDDMLDFLIPNYIKEG
KSQLDIGIGCTGGRHRSVAIADEVFRRLEEKKHRVVIEHRDIEKDSRGVGK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgtaatagtaactggcatgtcaggggcaggaaaaagtctcgtaacaaaatat
ttggaagatatcggatttttttgtgttgataatttgccgccttcattaatacttaaattt
gctgaaattagtgctcagagtgaaggcaaaatggaaaaaatagcattagttatagatatt
agaggcggagaattattgcatgatcttttcccagctcttgatgagattcagcaatcgggt
ttttcatacgagatattatttttagaggctgatgatgatgttcttgttaagagatataaa
gaaagcagaaggcagcatccgctttcacaagagggaagattattaaagggaataaaagag
gaacgtaaggctcttgaaaaaataaaagctaaggctaattatattattgatacttcaact
cttgccacacgtcagcttaagcaggaaattaacaacatatttctagagggtaaaaccttt
acaggtataattataaatattgtttcatttggctttaaatatggaataccaacagattgt
gatttagtatttgatgttagatttattccaaatccttattatattgcaccgatgaagcta
aaaactggtaaggatgaaatggtaaaagaatttgtattaaatgcccctgaaacaaaggag
tttttagggaaattagatgatatgctggacttccttattcctaattatataaaagaaggc
aagtctcaattggacattggaattggttgtacaggaggaaggcacaggtctgttgctata
gctgatgaggtttttagaagattagaagaaaaaaaacacagagtagtaattgaacatagg
gatatagagaaagatagcagaggtgttggtaaatga
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