Ruminiclostridium herbifermentans: EHE19_006170
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Entry
EHE19_006170 CDS
T07161
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00550
Peptidoglycan biosynthesis
rher01100
Metabolic pathways
rher01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EHE19_006170
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EHE19_006170
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
EHE19_006170
Enzymes [BR:
rher01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EHE19_006170
Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EHE19_006170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QNU68024
UniProt:
A0A4U7JGA1
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All DBs
Position
1427388..1429502
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AA seq
704 aa
AA seq
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MKQFFKDRYNILGISIVMVFALIVYQLVNIQLIQGENYFNQSQSINLKSRTILAERGNIL
DRYGVPIATNSSSYSLMLMTTGTSSDQLNEILLKLSKILEKNGDTYKNSFSKYLTYNPIE
FGSAIAKSQDRIKALRNVTGYPFQGYNQASTAKDVFNYLKDTAFKIDKKYSDEEAYKIMT
LRFEIMGYNSLNPVIAENISNATVAEVEERIDEFPGAIIDTVPSRKYVDAEYAAHLIGYV
RTVSENDLIKHADEGYNMNDIIGKSGIELTAEGYLRGTNGYRRIEIDDNGKTKIISEEAV
KPGSDVVLTIDMRLQKAAMDSLEKNIPIIRERKNSQNHKDAYAGAVVALDVKTGDVLALA
SYPSYDPSIFLADASDKEAQKAISALYDASNTTTSEYNRATKGIYAPGSTFKPLVGIAGL
EEGVINPYEKYFDKGYVQYGDIMLKSIEYRTYKGGLGWVNMIQAIQKSSNPYFYVLGNKV
GINNIVKWATRFGLGQKTGIELDESTGNISSREFKAKIDPDPWTETNTAQSAIGQLYNSF
TPIQLANYTATIANGGKRFKPHVIKRVIKYDGSIVTETKPEYEILPVKKENMAIIQEGMK
AVANSEDPGGTASSAFVELLPIKVAGKTGTAETGNEANHSSNALFICYAPADNPEIAVAV
VVERGVLGAYTAPIACDVLKEYFDIKGVQNEDYAVKRDIVELTR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttttttaaggatagatataatattttaggtataagtatagtgatggtattt
gcattaattgtatatcaattggtaaatattcagctaattcagggtgagaattatttcaat
caatctcaatccataaacttaaaatcaaggacaattttagctgaaagaggcaatattctt
gatagatatggagttcctatagctactaattcaagtagttattctctgatgctaatgaca
acaggaacttcttcagaccaattaaatgagattctattaaaattatctaaaatattagag
aaaaatggtgacacttataaaaattcattctctaagtacttgacttataatccaattgaa
tttgggtcagcgatagctaaaagtcaagatagaatcaaagctttaagaaatgtaacaggg
tatccgtttcaaggatataatcaagcttccaccgcaaaagatgtattcaattatttaaag
gatactgcttttaaaattgacaagaagtattccgatgaggaagcttataagattatgaca
ttaagatttgagataatgggatataattctttaaatcctgtaattgcagaaaacattagt
aatgcaactgtcgctgaagttgaggagagaatagatgagtttccgggtgctataattgat
actgtacccagcagaaaatatgttgatgctgaatatgcggctcatttaattggatatgtg
aggacagtcagtgaaaatgatttgattaagcatgctgatgaaggctataatatgaatgat
attataggcaagtccggaatagaactcacggctgaaggatatttgagaggaaccaatgga
taccgaagaattgagattgatgacaatggtaaaacaaaaatcattagtgaagaggccgtg
aagcccggaagtgatgtggtgcttacaatagatatgcgacttcaaaaggctgccatggat
tctctggaaaagaatattccaattataagagaaaggaaaaattctcagaaccacaaggat
gcatatgctggtgcagttgtagcactagatgtaaagacaggtgacgtattggctttagct
agttatcctagctatgatccgtcaatatttttagcagatgctagtgataaagaagcacaa
aaggctataagtgccctttatgatgcttctaataccacaacctctgaatataatagggca
acaaaaggaatttatgcaccagggtcaacatttaagcctcttgttggtattgcaggctta
gaggaaggtgttataaacccatatgagaagtactttgacaaaggatatgttcaatatgga
gatataatgcttaagtcaatagaatacaggacatataagggaggacttggatgggttaat
atgattcaggcaatccagaaatccagtaacccctatttctacgtgctaggcaataaagta
ggcattaataatattgttaagtgggcaacaaggtttggactaggacaaaaaacaggaatt
gaactagatgaaagcacaggaaacatatcctctagagaatttaaagcaaagattgacccg
gatccatggacagaaacaaatacggctcagtctgctataggccagctttataacagcttc
acacctatacagttggcaaattatacggcaacaatagctaatggtggtaagagatttaag
ccgcatgttattaagagagtaataaaatatgatggttcaattgttacagagactaaacca
gaatatgaaatattgcctgttaaaaaagaaaatatggctattattcaagaaggaatgaaa
gctgttgcaaatagtgaagatcctggaggaactgcttcatcagcgtttgtagagttactt
cctattaaagttgctggtaaaactggaacggctgaaactggaaacgaagcaaatcactct
tcaaatgcattgtttatatgctatgctcctgcagacaatcctgaaatagctgttgcagtt
gttgttgagagaggagtattgggcgcatatactgcacctattgcttgtgatgtgttaaaa
gagtattttgatataaaaggtgttcagaacgaggattacgctgtgaaaagagacatagtt
gaattgactagatga
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