Ruminiclostridium herbifermentans: EHE19_006990
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Entry
EHE19_006990 CDS
T07161
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rher03032
]
EHE19_006990
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_006990
Enzymes [BR:
rher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EHE19_006990
DNA replication proteins [BR:
rher03032
]
Prokaryotic type
DNA Topoisomerases
EHE19_006990
DNA repair and recombination proteins [BR:
rher03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EHE19_006990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Glyco_hydro_79C
Motif
Other DBs
NCBI-ProteinID:
QNU68785
UniProt:
A0A4U7JP66
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All DBs
Position
1657203..1659395
Genome browser
AA seq
730 aa
AA seq
DB search
MTPKKIIVEEQNIIETLESNYMPYAMSVIVSRAIPEIDGFKPSHRKLLYTMYKMSLLTGQ
RTKSSNIVGQTMKLNPHGDLAIYETMVRLTRGNNALLHPFIDSKGNFGKQFSRDMKFAAP
RYTEAKLDKICEEIFKDIDKNPVDFMDNYDSTMKEPVLLPTTYPNILVNANQGIAVGMAS
NICSFNLKEICETTSALIDNENIDITEYLKAPDFSSGGQLIYSEKDIKEIYDNGRGSVKV
RAKYNFDKANNCIEIIEIPYSTTVEAIMDQIIDLVKSGKIKEITDVRDETDLSGLKLTID
IKKNTDADALMNKLYRFTTLQDSFNCNFNILINGRPRVMGIKTILNEWLKFRIECIKRQT
FYDIGKKKDKLHLLLGLKKILLDIDKAIAIIRGTEQDALVVPNLMKGFEIDQIQAEFIAE
IKLRNLNKEYILNKVSEIEDLIKEIADLEDIYKSEARIKKIIQKQLKEVAKKYGQPRRTE
IISEEHIEEITTEHLIEDYNLKLFLTEHNYLKKITLVSLRSSSEQKLKDDDTIIQEVETH
NKSDLLLFSNKCNVYKMKIYDIPDCKASSLGEYITNLLGLDNDEKIVYIAATDNYEGYML
FFYENGKGAKIDMSSYATKTNRKKLANAYYSESPLVRMMYIKGDIDLVAQSSIKKVLVFN
TEEINSKTTRASQGVQVLTSKKGSTLVSVQTLEERKLSNPDYYRTKNIPAIGCYLKEEDK
GDSQLSLDLE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgactcctaaaaaaataatagttgaagaacaaaatataatagagactcttgaatcaaac
tatatgccatatgctatgagtgttattgtatcaagagctattcctgaaattgatggattt
aagccttcgcatagaaagcttctctataccatgtacaagatgtcactgctgactgggcaa
agaactaaatcctcaaatattgtaggtcaaactatgaagctaaatccccacggggatttg
gcaatatatgaaactatggtgcgattaacaagggggaataatgctctgcttcatcccttt
attgattcaaaaggaaattttggaaaacagttttcaagagatatgaagtttgccgctcct
cgatatactgaggctaagctggataagatatgtgaagaaatattcaaagatatagataaa
aatcctgttgactttatggataattatgatagtaccatgaaggaaccagttttattacca
actacatatcccaatattttagtaaacgcaaatcaaggaatagcagttggcatggctagt
aatatttgcagcttcaatttgaaggaaatatgcgaaacaacttctgctcttattgataat
gagaatattgatattacagagtatttaaaggcgcctgatttctcatctggaggtcaatta
atatattctgaaaaagatatcaaggaaatatatgataatggaagaggtagcgtcaaagtt
cgtgcaaagtataattttgacaaagccaacaactgtatagaaataattgagataccttat
tcaactacagttgaggcaataatggaccagataatagatttggttaaaagcggtaagatt
aaggaaattactgatgttagagatgaaacagatttaagtgggctgaagcttacaattgat
atcaagaaaaataccgatgctgatgctctaatgaacaagctttacaggtttactacatta
caagatagcttcaattgcaattttaatattctaataaatggaagaccaagagttatggga
attaagaccattctaaatgagtggcttaaattcagaatagaatgtataaaacgtcagact
ttttatgatattggaaagaagaaggataagcttcatctattactgggtctgaagaaaata
ttacttgatattgataaggcaattgcaataattagaggaacagagcaggacgcgttggtt
gtaccaaacttgatgaagggctttgaaatagatcaaattcaagctgagtttattgctgaa
attaagcttagaaatttaaacaaagaatatattttaaacaaggtaagtgaaattgaagat
ttaatcaaggaaatagcagatttagaggatatttacaaaagtgaagccagaataaaaaag
attattcaaaagcagctgaaggaagtagctaaaaagtatgggcagccaagacgcacagag
ataatcagtgaagagcatattgaagagataacaactgaacatcttattgaggactacaat
ttgaagctgttccttacagagcataattaccttaaaaaaattactcttgtttctcttaga
tcaagctctgagcaaaagcttaaggatgatgacacaataattcaagaggtggaaactcat
aataagtcagatttattattgttttcaaataaatgcaatgtgtacaaaatgaaaatatat
gatatacctgattgtaaagccagcagtttaggagaatatattacaaatctgttaggtctg
gataatgatgaaaagatagtatatattgcagctacagataattatgaaggttatatgctg
tttttctatgaaaatggaaaaggagcaaaaattgatatgtcaagctacgctactaagaca
aatagaaagaagctggcaaatgcttattacagtgagtcaccattagttagaatgatgtat
ataaaaggtgatatagacttagtagcacaaagcagtattaaaaaggttctagtttttaat
actgaagaaattaactcaaaaaccacaagggcatcacaaggggtacaggttcttacttct
aaaaagggcagtacactagtgagtgtacagactttagaggaaagaaagctttctaatccg
gattattataggacaaagaatatacctgcaattggatgctacttgaaagaagaggataag
ggagattcccaattgagtttagatttagaataa
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