Ruminiclostridium herbifermentans: EHE19_007615
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Entry
EHE19_007615 CDS
T07161
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EHE19_007615 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_007615 (ruvB)
Enzymes [BR:
rher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHE19_007615 (ruvB)
DNA repair and recombination proteins [BR:
rher03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHE19_007615 (ruvB)
RecFOR pathway proteins
EHE19_007615 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
DUF815
Sigma54_activ_2
AAA_22
nSTAND3
AAA_14
AAA_24
RNA_helicase
AAA_18
AAA_3
TsaE
NTPase_1
MCM
Bac_DnaA
NB-ARC
Rad17
AAA_2
IstB_IS21
MotCF
PaRep2b
AAA_25
AAA_17
NPHP3_N
ABC_tran
AAA_28
NACHT
AAA_11
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QNU68270
UniProt:
A0A7H1VSA8
LinkDB
All DBs
Position
1818362..1819363
Genome browser
AA seq
333 aa
AA seq
DB search
MEDERLVNRETHSEDIDEVSLRPKKLDEYIGQSKVKSNLNVFIEAAKRRNEALDHVLLYG
PPGLGKTTLASIISSEMGVNLRITSGPAIEKAGDLAAILTNLSTHDVLFIDEIHRLNRSV
EEILYPAMEDYALDIIIGKGPSARSIRIDLPKFTLIGATTRAGLLTAPLRDRFGVINKLE
MYTADELKHIVKRSAGILNIELDEDGAYEIARRSRGTPRIANRLLKRVRDFAQVIGKGII
DLKVAKHALDALEVDEIGLDGVDRNMLLSIITKFSGGPVGLDTLAASIGEDPGTIEDVYE
PFLIQLGYINKTPRGRMATRHAYEHFGLPFGEE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaagactagtaaatagagaaacacattctgaagatattgatgaagtgagt
ttaagaccaaaaaagcttgacgaatatataggacaatccaaggtgaagagtaatctgaat
gtatttattgaggctgctaaaagaagaaatgaagctttggatcacgttttactatatgga
cctcctggattgggaaagactacacttgccagtataatttcatctgaaatgggcgtaaac
cttagaattacatcgggaccagcaattgaaaaagcaggggatttggctgcaatactaaca
aatttaagcacccatgatgtactttttattgatgaaattcatcgccttaacaggagtgta
gaagaaattttatatccggctatggaagactatgccttggacataatcataggtaaggga
ccaagtgctcgttctattagaattgaccttcctaaatttacattaataggtgctactacc
agagctggactacttactgccccgctcagggatagatttggcgttattaataagcttgaa
atgtatactgccgatgaacttaagcatattgtaaagcgttctgcaggaatacttaacata
gaattagatgaagatggtgcttatgaaattgcaagaaggtcaagaggaacgcctagaatt
gcaaacaggctattgaaaagggttcgtgattttgcgcaagttattggaaaagggataata
gatttaaaggttgcaaaacatgcccttgatgcccttgaggttgatgaaattggtcttgat
ggcgtagatagaaatatgcttttgagtataataacaaaatttagtgggggacctgtagga
cttgatactcttgcagcttctattggagaggacccaggaacaatagaggatgtatatgag
ccttttcttatacaactgggttatattaataagacacctagagggagaatggctacaagg
catgcatatgagcattttggactgccttttggggaggaatag
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