Ruminiclostridium herbifermentans: EHE19_007745
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Entry
EHE19_007745 CDS
T07161
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rher03009
]
EHE19_007745
Enzymes [BR:
rher01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EHE19_007745
Ribosome biogenesis [BR:
rher03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EHE19_007745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QNU68289
UniProt:
A0A4U7JJU9
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All DBs
Position
1848817..1849551
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AA seq
244 aa
AA seq
DB search
MSDRQRLDKVLSNFGFGSRKEIKSAVKTGLVTIDGIIAKDSATYVDPNVNVIEMNGERLN
YRKYIYLMMNKPKGVISATTDTRQKTVFDILPEEYKCFDLFPAGRLDIDTEGLVLMTNDG
QLAHEILSPKKHVTKKYYAHVLGRVDDSDIEAFEKGVILDDGYKTLPAQLEIIKSGEISE
IKLSIVEGKFHQVKRMFEAVNKKVIYLKRLTMGRLELDETLALGECKELCEEDIALLKAS
VQKN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagacaggcaaagactggacaaggtgctttctaattttggatttggttcaagaaaa
gaaataaaaagcgctgtaaaaactggtttagtcacgatagatggcattattgccaaagat
agtgcaacatacgttgatcccaatgtaaatgtaatagaaatgaatggcgaaagacttaat
tacagaaaatatatttatttgatgatgaataagccaaagggagtaatatcagcaactaca
gatactagacaaaagactgtttttgatattttgcctgaggaatacaagtgttttgatttg
tttccagcaggaagactggatattgatactgaaggacttgttttaatgacaaatgacgga
cagctggcacatgaaattctatcacccaaaaaacatgttacaaagaagtattatgcccat
gttttaggcagagttgatgacagtgatatagaagcttttgaaaagggagtaatattagat
gatggatataaaacacttcctgcacagcttgagataattaaatctggtgaaatatcagaa
attaagctatctattgtagaaggcaaatttcatcaagtgaaaagaatgtttgaagctgtt
aataagaaggtcatttatttaaaaagacttaccatgggaaggttagaacttgatgaaaca
cttgcgcttggtgaatgtaaagaactttgcgaggaggatattgcacttttgaaggcttct
gtacaaaaaaattaa
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