Ruminiclostridium herbifermentans: EHE19_009295 Help Entry EHE19_009295      CDS       T07161                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism rher  Ruminiclostridium herbifermentans Pathway rher03018   RNA degradation Brite KEGG Orthology (KO) [BR:rher00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     EHE19_009295  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rher03019]     EHE19_009295 Messenger RNA biogenesis [BR:rher03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      EHE19_009295 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  QNU68568 UniProt:  A0A4U7JKS5 LinkDB All DBs Position 2241597..2243264 Genome browser AA seq 555 aa AA seqDB search MSKSKKKLRVIPLGGLQEIGKNITAFEYGDDIVVVDCGLSFPEDEMLGIDLVIPDVTYLV KNKEKVRAIVLTHGHEDHIGALPYVLRELNVPVYGTKLTIGLIKCKLEEHSLLDTTDLRT VCAGQTIDLGAFKVEFIHNTHSIADSVSLAIHTPLGVIVHTGDFKIDYTPIQGETMDLAR FAELGKKGVLLLMCDSTNIENEGYTMSERTVGETFNEIFADCKGRILVATFASNVHRVQQ VINSAVKYGRKVTVIGRSMVNVVNVAIELGYLIIPEGVLVDMENMDKIPPDKLVIITTGS QGETMSALTRITFGEHKKVEIYPGDLVIISASPIPGNEKLISRVVNELFKKGAKVVYEAL ADIHVSGHACQEEIKLIHNLVKPKFFMPVHGEHRHLRQHTDLAIKMGMPSENVFILENGK VLELTHDSAKINGSVTAGRVLVDGLGVGDVGNVVLRDRRHLSQDGLIVVVITIEGDTGNV VAGPDIISRGFVYVRESEDLMDQIKEIAKQAVNKSAGKSRGDWSIRKSAIREDLKDCIYQ KTKRKPMILPIIMEI NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt gtgtcaaaaagtaaaaaaaagttaagagtaataccattaggtggattgcaggaaattggc aagaatattactgcgtttgaatatggtgatgatattgttgttgttgattgcgggctttca tttcctgaggatgaaatgctgggaattgatttagttataccagatgtgacttatttagtt aaaaataaagaaaaggttagggcaatagtattaacccatggacacgaggaccatattgga gcactgccatatgttttaagagaattaaatgttcctgtatatggaacaaaattgactata ggtttaataaaatgcaagcttgaagagcatagtttgctagatactactgatttaaggact gtttgtgcaggtcaaactattgaccttggagcttttaaggtagaatttattcataatact catagtattgctgattcggtatctttagctatacacactccattaggagttatagttcat actggagattttaagattgattatactccaatacaaggcgaaacaatggatttagcaaga tttgctgaacttggaaaaaaaggtgttctattacttatgtgtgatagcactaacatagaa aatgaaggctatacaatgtctgaacgtactgttggagaaaccttcaatgaaatttttgct gactgcaagggtaggattttggttgcaacctttgcatcaaatgttcatagagtacagcag gtaatcaattctgcagttaaatatggtagaaaggttactgttattggaagaagcatggta aatgttgttaatgtagcaatagaacttggttatttgattattccagagggtgtacttgtt gatatggaaaacatggataaaattcctcctgataagcttgtaataattactacaggcagt cagggtgaaacaatgtctgcgttaacaagaattacttttggagaacataaaaaagtagaa atatatcctggggatttagtaattatttcagcttcacctatccctggtaacgaaaaactt atttcaagagttgtaaatgaactgtttaaaaagggtgctaaagttgtatatgaggcatta gctgatattcacgtctcgggacatgcgtgtcaggaagaaataaagcttattcataatctc gttaaaccaaaatttttcatgccagtacacggagaacacaggcatttgagacagcatact gatttggcaataaaaatgggaatgccaagtgaaaatgtattcatattagaaaacggtaaa gtgctagagttaacccatgattctgccaaaataaatggaagtgttacagctggaagagtc cttgtagatggacttggagttggagatgttggtaatgttgttcttagagatagaagacat ttatcacaggatggcttgattgtggttgttattactattgaaggtgatactggcaatgta gtagcaggccctgatattatttcaagaggctttgtttatgttcgtgaatcagaagatttg atggatcagataaaagaaattgcaaaacaagctgtcaataaaagtgcaggcaaaagccgc ggtgattggtctattagaaagtctgctatacgtgaggatttaaaagactgtatttatcag aaaacaaagcgtaaaccaatgattttgccaataataatggagatataa

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