Ruminiclostridium herbifermentans: EHE19_010060
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Entry
EHE19_010060 CDS
T07161
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher02024
Quorum sensing
rher03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHE19_010060 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EHE19_010060 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rher03019
]
EHE19_010060 (hfq)
03036 Chromosome and associated proteins [BR:
rher03036
]
EHE19_010060 (hfq)
Messenger RNA biogenesis [BR:
rher03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EHE19_010060 (hfq)
Chromosome and associated proteins [BR:
rher03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
EHE19_010060 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
QNU65288
UniProt:
A0A4U7JKF7
LinkDB
All DBs
Position
complement(2453111..2453353)
Genome browser
AA seq
80 aa
AA seq
DB search
MVKSTINLQDIFLNQVRKEHIAVTIYLTNGFQLKGMVKGFDNFTVVLDSDGKQQLVYKHA
ISTITPMKMVNLIFNEQIKE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaaagtacgattaacttgcaggacatttttttgaatcaggtcaggaaagagcat
atagctgttacgatatacttaacaaacggatttcagctaaaaggaatggttaagggcttt
gataactttactgttgttttagatagcgatgggaagcagcagttggtttataagcatgca
atatctacaataactcctatgaaaatggtaaacttaatatttaatgaacaaataaaagag
taa
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