Ruminiclostridium herbifermentans: EHE19_010085
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Entry
EHE19_010085 CDS
T07161
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rher03016
]
EHE19_010085 (miaB)
Enzymes [BR:
rher01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
EHE19_010085 (miaB)
Transfer RNA biogenesis [BR:
rher03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
EHE19_010085 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QNU65292
UniProt:
A0A4U7JIL5
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All DBs
Position
complement(2461333..2462766)
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AA seq
477 aa
AA seq
DB search
MSEGKRVTTKVSAEEINAQYKYIEAIKQYVQDLTIKLGKPIRYNIETFGCQMNENDSERL
AGMLSEMGYSECDDRSDSDLIIFNTCCVRENAEQKVYGHLGALKKLKEVNPNLIIAICGC
MMQQPEVVAHIKKVYRHVDIIFGTHNLYKLPELLNTAIASDKMVIDVWDSTGSIAENMPI
SRKDKLKAWVTVMYGCNNFCSYCIVPYVRGRERSRGIDEIRNEVIKLAEDGCKEITLLGQ
NVNSYGKDLEGDYTFANLLRELNKIDGIERIRFMTSHPKDLSDDLIYAIRDCEKVCEHLH
LPVQAGSSKILEDMNRKYSKEQYLSLIAKVKEHIPDIGLTTDIIVGFPGETEEDFAETLD
VVSKAKYDMAYTFLYSKRTGTPAAKNPNQVPEEVMKDRFDRLLELQNSISLQINNELLGK
EVEVLVEGLSKNSKTTYTGRTRQNKIVNFKGSPDLVGKLIKVRIDGIQTWSLNGTLD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaaggaaaaagagttacaacaaaagtatctgcagaagaaattaacgcgcagtac
aaatatatagaagctattaagcaatatgtacaagatttaactataaagttaggtaaacca
attagatacaacattgaaacttttggttgtcaaatgaatgaaaatgattcggaacgtctt
gcaggaatgctttccgaaatgggatattctgaatgtgatgatcgttcagacagtgactta
attatattcaacacttgttgtgttcgcgaaaatgccgagcaaaaggtttatggacatcta
ggagctttaaaaaagttgaaagaagtaaatccaaatcttattattgctatatgcggctgt
atgatgcagcagccagaagttgttgcgcatataaaaaaggtgtaccgacatgttgacata
atattcggcacacacaatttatataaacttcctgaattactcaatactgcaattgcgtct
gataaaatggttattgatgtttgggattcaacaggttcaattgctgaaaacatgcctatt
agcagaaaagataaactcaaagcttgggtaactgttatgtatggctgtaataatttctgc
tcctattgtattgtgccatatgtcagaggaagagaacgcagcaggggaattgatgaaata
agaaacgaagtaataaaattggctgaggatggatgtaaagaaataactttattaggtcaa
aatgtaaattcctatggtaaggatttagaaggagattacacctttgccaacctattaagg
gagttaaataaaattgatggtatcgaacgaatcagatttatgacttctcatcctaaagac
ttatcagatgatttgatttatgccattcgtgactgtgaaaaggtttgcgagcatttacat
ttgcctgttcaggctggaagttctaaaattcttgaggacatgaatagaaaatattcaaaa
gaacagtatttgagtttaattgcaaaggttaaagagcatatacctgatattggcttgact
actgatattatagttggatttcctggcgaaactgaagaggactttgcagaaacattagat
gttgtttctaaggcaaaatatgatatggcatatactttcctatactcaaagaggactggt
acgccggcagcaaagaatccaaatcaagttcctgaagaggttatgaaagatagatttgat
agattattggagttacaaaattccataagtcttcagattaataatgaacttctgggaaaa
gaagtggaagtacttgtagaggggcttagtaaaaacagcaaaaccacttatactggcaga
acaagacaaaataaaattgttaattttaaaggaagtcctgatttagttggaaagctgata
aaggtcagaattgatggaatacagacatggtcgttaaatggaacccttgattag
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