Ruminiclostridium herbifermentans: EHE19_010215
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Entry
EHE19_010215 CDS
T07161
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00900
Terpenoid backbone biosynthesis
rher01100
Metabolic pathways
rher01110
Biosynthesis of secondary metabolites
rher03010
Ribosome
Module
rher_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
EHE19_010215
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
EHE19_010215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rher03011
]
EHE19_010215
Enzymes [BR:
rher01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
EHE19_010215
Ribosome [BR:
rher03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
EHE19_010215
Bacteria
EHE19_010215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
S1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QNU65315
UniProt:
A0A4U7JK85
LinkDB
All DBs
Position
complement(2494766..2496787)
Genome browser
AA seq
673 aa
AA seq
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MHIVVASTAGFCFGVNNAVKIVFDLAEKSEDKVYTFGPIIHNEQVVNKLQEHGILAINSP
EQVSAPSKVVIRAHGVGPSVISEFEAKGIEVVNATCPYVEKMQRLVNKKYNEGYQIIIIG
DKEHPEIIGITGWCNNTAYIIDSIEQVKTLPNIEKNICVVAQTTFIREKWEKIIDSLNKR
FKNVLKFDTICNATDKRQSEADKISKEVDMVLVIGGENSSNTNKLFEICRANCPETYKIQ
TASDIPPVDIKKIKKIGITAGASTPDWVIKEVIHNMSELNKQDLEMSFADAFESSLVTLT
TGQITKGRIIGFNLNEVYVDLGFKSDGIIPMEEFTDDIDFDPEKSLKVGDEVDVFVVRVN
DGEGNVILSKKKVDAVKGWEVLEDAFENKRPIAVKISEQVNGGVIGYSHGVKIFIPASQI
SDRFVKDLSSFVRQVVQVQIIEINKQKRKVVASARIIIERNKEFASNEIWNNIEIGKVYK
GQVKSLMDFGAFVDIGGVDGLVHLSELSWNKIKHPSEVVKVGDEITVYVIDFDKEKKRIS
LGFKKKEDNPWVSAIKKYEVGNVITGKVVRLVPFGAFVEIEQGLDGLVHISQISSVRLGK
PGDVLKIGQEVQAKITELDAEAKKISLSIKEVNPIDPKGAKKDAPVAADEELPTEHKEDM
TNTIAENLNSLND
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcatatagtcgtggcaagtactgctggattttgttttggtgtaaataatgctgtaaaa
attgtttttgatttagcagaaaaatctgaagataaagtatacacttttggtccaattatt
cataacgagcaagtggtgaataaattgcaagagcatggaatattagctattaattcgcct
gaacaggtatctgctccttcaaaggtagttatcagggctcatggcgttggacctagtgtt
atatcagaatttgaagctaaaggtattgaagttgttaatgctacatgtccatatgtagaa
aaaatgcaacgcttagttaataaaaagtataatgaaggctatcagataattataattgga
gataaagaacatcctgaaattattggaataactggatggtgtaacaatactgcttatatt
attgacagtattgaacaggttaaaacattacccaacatagaaaaaaacatttgtgttgtt
gctcaaactacatttattcgagaaaaatgggaaaaaattattgatagtttaaataaaagg
tttaaaaatgttttaaaatttgatacaatatgtaatgcgacggataaaagacaatcagaa
gcagataaaatttcaaaagaagtagatatggtacttgttattggaggagaaaacagttca
aataccaataaactatttgaaatttgcagggctaactgcccagaaacttacaaaatacaa
acagccagtgatattccaccggttgatataaaaaaaattaaaaaaattggtattactgcg
ggggcgtcaacacctgactgggtaatcaaggaggttattcataacatgagtgaattaaat
aaacaggatttagagatgagctttgctgatgcatttgaaagctcactggtgacattgaca
acgggtcagatcacaaaaggaaggattattggttttaatttaaatgaagtatatgtcgac
ttgggcttcaaatcagatggcattattccaatggaggagtttactgatgatatagacttt
gatcctgaaaaatcacttaaagttggagatgaagttgatgtttttgtagttagagttaat
gatggtgaaggaaatgtaattttaagcaaaaagaaagttgatgctgttaaaggctgggaa
gttcttgaagatgcttttgaaaacaagagaccaatagctgttaaaataagtgaacaggta
aatggtggggtaattggctattcacatggcgtaaaaatatttattcctgcttctcaaata
agtgatagatttgtaaaagatttatcatcttttgtaagacaagtagtgcaagttcaaatt
atagaaataaacaagcagaaaagaaaagtagttgcttcagcaagaattattattgagaga
aataaagaatttgcgtcaaatgaaatatggaataatattgaaataggaaaagtatacaaa
ggtcaagttaagagtcttatggactttggcgcatttgtagatataggtggagtagatggt
cttgttcatttatcagaattatcttggaataagattaaacatccatcagaagtagttaag
gttggagatgaaataactgtttatgttattgattttgataaagaaaagaagcgtatttca
cttggattcaaaaagaaagaggataatccttgggtaagcgctatcaaaaagtacgaagtt
ggaaatgttattactggtaaagttgttcgtttagtgccttttggtgcttttgtagaaatc
gaacagggacttgatggacttgttcatatttcacaaatatcatcagttagattaggtaaa
ccaggagacgttctaaaaataggtcaagaggttcaagctaaaattacagaacttgatgca
gaggctaagaaaataagccttagtattaaagaggttaatccaattgatcctaaaggagca
aagaaggacgcacctgttgctgctgatgaggaattgccaactgagcataaagaagatatg
acaaatactatagctgaaaatttgaatagtttaaatgattaa
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