Ruminiclostridium herbifermentans: EHE19_010465
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Entry
EHE19_010465 CDS
T07161
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher02024
Quorum sensing
rher03060
Protein export
rher03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
EHE19_010465 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EHE19_010465 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EHE19_010465 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rher02044
]
EHE19_010465 (ffh)
Enzymes [BR:
rher01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
EHE19_010465 (ffh)
Secretion system [BR:
rher02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
EHE19_010465 (ffh)
Eukaryotic Sec-SRP protein
EHE19_010465 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_30
CbiA
Zeta_toxin
AAA_31
AAA_22
6PF2K
APS_kinase
AAA_16
AAA_33
CLP1_P
AAA_19
Fer4_NifH
AAA_17
TctA
MMR_HSR1
PIF1
NPHP3_N
AAA_5
PDE8A_N
AAA_18
ATP_bind_1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QNU65363
UniProt:
A0A4V6ER25
LinkDB
All DBs
Position
complement(2547071..2548423)
Genome browser
AA seq
450 aa
AA seq
DB search
MSVFEGLSGKLQETMKKFRGQGRVSEKDVKEMMREIKLALLEADVNFKVVKDFINKISER
AVGQDVLESLTPGQQVVKIVHEELIELLGREQSKVTFSSKPPTVLLMVGLQGSGKTTTSG
KLASLLRKQGKSPLLVACDVYRPAAIKQLQVVGGQLNIPVFTIENNTNPVEIATEAVKFA
NFKQHDLVIIDTAGRLHIDEKLMDELLNIKKAVNPHEILLVVDSMTGQDAVNVSQSFNEK
LGIDGVVLTKLDGDTRGGAALSVKTVTGKPIKFIGVGEKLNEIEPFFPDRMASRILGMGD
VLSLIEKAQDAFDEKQALELEKKMRTMQFTLEDFLEQMQQIKKMGSIGDILGMMPGIDSK
ALKEINQEESEKNMARTEAIIRSMTKKERNDPSIINASRKKRISAGSGTTVQEVNALLKQ
FEEMRKMMKMMTDMGKRSKKGGLGRFRLPF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtttttgagggtttgtcaggaaagctccaagaaacaatgaaaaaatttcgtggg
cagggcagagtatccgaaaaagatgttaaagaaatgatgagagagataaagcttgctttg
ctcgaggctgacgtaaattttaaagtagttaaggattttattaacaagatatctgagagg
gcagtaggacaggatgttttagaaagtctaaccccaggacagcaggtagttaaaatagtt
catgaagaacttattgagttgttaggcagggagcagagcaaggttacattttcctcaaag
cctccaacagtattattaatggtagggttacagggttctggtaaaacaactacttcagga
aagctggcaagcctgttaagaaaacagggtaagtcaccgcttttagtagcttgcgatgtt
tatagaccagctgctatcaaacagcttcaggttgttggcggacagttaaatattccggta
tttacaatagaaaacaatacaaatccagttgaaatagcaacagaagcagttaagtttgct
aattttaaacaacatgatttagttataatagatactgccggaagacttcatattgatgaa
aaactgatggatgaactgctcaatataaagaaagcagttaatcctcatgaaatattgtta
gttgttgattctatgactggacaagatgctgttaatgtatcacaaagcttcaatgaaaag
ctaggcattgacggagtagttctgacaaagcttgatggtgatacaagaggtggagcagct
ctttctgttaagactgttacaggcaagcctattaaatttataggtgtgggtgaaaaactc
aatgaaattgaaccgtttttcccagatagaatggcatcacgtatacttggtatgggtgat
gtattaagccttatagaaaaagcacaggatgcatttgatgaaaaacaggctcttgaactg
gaaaagaaaatgcgtactatgcagtttacattggaagactttttggagcaaatgcagcaa
attaagaaaatgggttctattggcgatatacttggaatgatgcctggcattgattcaaag
gctctcaaggaaattaatcaagaagagagcgaaaaaaatatggctcgtactgaggctatt
attagatcaatgacaaaaaaagaacgtaatgacccttctataattaatgcaagcaggaaa
aagagaatttctgctggaagtggtacaactgttcaagaggtcaatgctcttctcaagcag
tttgaagagatgagaaaaatgatgaaaatgatgaccgatatgggtaaacgaagtaaaaaa
ggcggattaggaaggtttagattacctttttaa
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