Ruminiclostridium herbifermentans: EHE19_010565
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Entry
EHE19_010565 CDS
T07161
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rher03019
]
EHE19_010565
03009 Ribosome biogenesis [BR:
rher03009
]
EHE19_010565
03036 Chromosome and associated proteins [BR:
rher03036
]
EHE19_010565
Enzymes [BR:
rher01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EHE19_010565
Messenger RNA biogenesis [BR:
rher03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EHE19_010565
Ribosome biogenesis [BR:
rher03009
]
Eukaryotic type
90S particles
RNase
EHE19_010565
Prokaryotic type
rRNA processing factors
EHE19_010565
Chromosome and associated proteins [BR:
rher03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EHE19_010565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
hDGE_amylase
RNA_pol_Rpb1_3
DND1_DSRM
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
QNU68838
UniProt:
A0A4V6EQ18
LinkDB
All DBs
Position
complement(2573697..2574434)
Genome browser
AA seq
245 aa
AA seq
DB search
MKMNNNDLINSLSELEGIIKYDFKDKKILQTAITHSSYANERKSKKLNYNERIEFLGDSV
LSLVISEYLYKMYPNLPEGELTVTRAKIVCENSLAKCAADIGLGTFLLLGKGEELSGGRV
KSSILSDAFEALIGAIYNDGGFETAKAFILKYMEDVIKSCVNGKLFYDYKTQLQELVQQN
GEQNIAYNVIDESGPDHNKTFVTEVCINGLITGKGTGHSKKESEQNAAKDALTKINNGDK
GVLYN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaataataatgacttaattaatagtctttcggaactagaaggtataataaaa
tatgattttaaggacaaaaaaatactacagacagctattactcatagttcgtatgcaaat
gaaagaaaatcaaaaaaattaaattataatgaaagaattgaattcttaggtgattcagta
ttaagtttagtgataagtgaatatttatacaagatgtatcctaatcttccagagggagaa
ttgactgtaacaagagcaaagattgtttgtgaaaattctcttgcaaaatgtgctgcggat
attggcttgggaacattcttgttattaggtaagggtgaggaactttcaggtggaagagtt
aaaagttcaattctatctgatgcctttgaagcattaattggagcaatatataatgatggt
ggctttgaaacggctaaagcctttattctcaagtatatggaagatgttataaaaagttgt
gtaaacggcaagttattttatgactacaaaacgcagcttcaagaattggttcaacaaaat
ggagaacaaaatattgcatacaatgttattgacgaaagtggaccggatcataataaaaca
tttgttacagaagtatgtataaatggacttattacaggaaaaggcactggtcattctaaa
aaagagtctgagcaaaatgcagcaaaagatgcactgactaagataaataatggcgataag
ggagtgttatataattaa
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