Ruminiclostridium herbifermentans: EHE19_010610
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Entry
EHE19_010610 CDS
T07161
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rher03009
]
EHE19_010610 (rimO)
Enzymes [BR:
rher01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EHE19_010610 (rimO)
Ribosome biogenesis [BR:
rher03009
]
Prokaryotic type
ribosomal protein modification factors
EHE19_010610 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
QNU65389
UniProt:
A0A4U7JID9
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All DBs
Position
complement(2582878..2584218)
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AA seq
446 aa
AA seq
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MKKKIGVVSLGCPKNLVDSEIMLGLLSKADYEIVNDKEQANILIVNTCGFIESAQQESIN
TILEMAEEKKRNCEILIVTGCMAERYKELILEQIPEVDAVLGTGNYEEIADTIKKAYKGE
KTVSYGRLEDVDYLDRERIISSSKQSVYLKISEGCDNRCTYCIIPYLRGRYRSRKMDALI
NEAELLAKHGAKELVLVAQDTTRYGIDIYGRKMLPELIQKLSKIEGIEWIRLLYCYPEEI
DDQLIQEIASNPKVCKYIDIPIQHASDRILKLMGRRGDISDIRTALYKLRENVKDIVIRT
TLIVGFPGETDEDFEQLISFVDEFKFDRLGVFTYSKEEGTPAAKMKNQINKKIKLKRQKA
VLDLQNTISKEINNNRIGKIYKAIVDGIADDGIFYYGRTYAEAPEIDGLIYFTSIEPLTI
GNFVDVRILNAEEYDLIGEVINEFTK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaaaaattggcgttgtttctttaggatgtcctaaaaatttagtagatagtgaa
ataatgcttggtttactatcaaaagcagactatgaaattgttaatgataaagaacaagca
aatattttgatagtaaacacctgtggatttatagaatctgcacagcaggaatcaataaat
actattttagagatggcagaggaaaagaaaagaaattgtgagatactgatagttacaggc
tgtatggctgaaagatataaagaacttatattagaacaaataccagaggttgatgcagta
cttggtactggtaactatgaagaaatagcagacacaataaaaaaagcatataaaggtgaa
aaaactgtatcctacggaagacttgaagatgtagattatcttgatagagagcgtattatt
tcctctagcaagcaatcggtttatctgaaaatatctgaaggctgcgacaatagatgcaca
tattgcatcattccatatttgagaggcagatacagaagcagaaaaatggatgctttaata
aatgaagctgagttattagcaaaacatggagctaaggaacttgtactagtagcacaagac
acaactagatatggaatagatatatatggcagaaaaatgctgcctgagcttattcagaag
ttatcaaaaattgaaggtattgaatggatacgcttgttatattgctatccagaggagatt
gatgatcaattaatacaagagatagcttcaaatccaaaagtttgtaagtatatagacata
cctatacagcatgcatctgatagaatattgaagcttatgggacgtcgtggagatatttcc
gatattcgtactgctctatacaagcttagagagaatgtaaaggatattgttataagaaca
actttaatagtaggatttcctggtgaaactgatgaggattttgagcaattaattagcttt
gtagatgaatttaagtttgataggttgggtgtgtttacttattcaaaagaagagggcact
ccagctgcaaaaatgaaaaatcaaataaataaaaaaataaaactaaagagacaaaaagca
gtattagatcttcaaaatactattagtaaggaaataaacaataatagaatagggaaaata
tataaagctattgttgacggaattgctgatgatggtatattctattatggacgtacttat
gcagaagcccctgagattgatgggttaatttattttacaagcattgaaccgcttacgata
ggaaactttgttgatgtaaggatattaaatgctgaagaatatgatttgataggagaggtc
ataaatgaatttaccaaataa
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