Ruminiclostridium herbifermentans: EHE19_011270
Help
Entry
EHE19_011270 CDS
T07161
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EHE19_011270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_011270
Enzymes [BR:
rher01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
EHE19_011270
DNA repair and recombination proteins [BR:
rher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EHE19_011270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QNU65508
UniProt:
A0A4V6YE63
LinkDB
All DBs
Position
complement(2756551..2757768)
Genome browser
AA seq
405 aa
AA seq
DB search
MERVYSVSDINNYIKQLVSNDGILSGLSVRGEISNFKHHYTGHMYFTIKDQNSVLKCVMF
KSHASLLRFAPQNGEKVIVSGYISVFERDGQYQLYASDMQPDGVGALHLAYEQLKNKLQK
EGLFDADKKKKIPILPKCIGVVTSSTGSVIRDIINVTYRRHSKMRIQLYPVAVQGAQAAG
QIAAAITKLNQLKQVDVIIVARGGGSLEELWAFNEEVVARSIYASDIPVISAVGHETDFT
ICDFVADMRAPTPSAAAELAVPDLEVLLYKLQNYSIRMKTSLVNKLEACRNQLQKVNSRN
VFRQPYDKVNQHRLRLDNDLKHLIKSSEMLIKEKKSQFAMLAGKLDALSPLKVFERGYSV
VKNSEGNIVSRVEQVSIGDTLEVSLRDGKIDCKVVSTKQGGSLNG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagtttattcggtttcagacataaataattacataaagcaattagtttcaaat
gacggcattttatcgggattatctgtaagaggtgaaatttcgaattttaagcatcattat
actggacatatgtattttactataaaggatcaaaatagtgtgttaaaatgcgttatgttt
aaatcccatgcctcattgctaagatttgctccgcaaaatggtgaaaaggttattgtttca
ggttatatatctgtttttgaaagagatggacagtatcagctctatgcaagtgatatgcag
cctgacggtgttggggctcttcatcttgcttatgagcagttaaaaaataaactgcaaaaa
gagggcttatttgatgctgataaaaagaaaaaaattcccatattgcctaaatgtattggt
gttgttacctcttcaaccggttcagttatcagagatattataaatgtaacctatagaaga
catagcaaaatgagaattcagttatatcctgttgcagtacagggagcgcaagctgcaggc
caaattgctgctgcaataacaaagctaaatcaattaaagcaagtagatgtaataattgtt
gcaagaggcggagggtcactggaggaactctgggcatttaatgaggaagtagtagcaaga
agtatttatgcatctgatataccagttatatctgctgttggacatgaaactgattttaca
atttgcgattttgttgctgatatgagagcaccaacgccatctgcagcagcagaattggca
gttccagatttagaggtgctgttatataagcttcagaattatagtataagaatgaagact
tctcttgtaaataagctggaggcttgtagaaatcagcttcaaaaggttaattccagaaac
gtttttcgtcaaccatatgataaagttaatcagcatagattaagattggataatgatttg
aaacatttgattaagagcagtgaaatgcttattaaagagaaaaaatctcagtttgcaatg
cttgcaggcaagctagatgcacttagtccgttaaaagtatttgaacggggttatagtgtg
gttaagaactcagagggtaatatagttagtcgggtagagcaggttagtataggagatact
cttgaagtttctttaagggatggaaaaatagattgcaaggtagtatcaacaaaacaagga
ggtagcttaaatggctag
DBGET
integrated database retrieval system
