Ruminiclostridium herbifermentans: EHE19_011465
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Entry
EHE19_011465 CDS
T07161
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rher
Ruminiclostridium herbifermentans
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rher03016
]
EHE19_011465 (thpR)
Enzymes [BR:
rher01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EHE19_011465 (thpR)
Transfer RNA biogenesis [BR:
rher03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EHE19_011465 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QNU65546
UniProt:
A0A7H1VJI4
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All DBs
Position
complement(2801432..2802169)
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AA seq
245 aa
AA seq
DB search
MKGKEMRLFFAIEFNEELKDYLFSIQKQVRQYCIGGNFTSKDNFHLTLRFIGEQSQQQAE
LLKSAMKATATSLESSTEKSGARYLLNNKEKHIDTFSAVNTDDGISQRGAKLFEGEEIHE
STSISSGGACKPGFELRLSKIGKFDRGNKKILWVGLQRSQQLQALHNKLETNLFKVGYNK
EERGYNPHITLAREVRIEAFDQLANEIKLNETSIWVNAISLMESKRINNKLCYVPIERVE
FAGKK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaaagaaatgagattattttttgctattgagtttaatgaagaactaaaggat
tatttatttagtattcaaaaacaggtcaggcaatattgcataggaggaaattttacctca
aaagataattttcacttaacattacgttttattggagagcaaagtcaacaacaagcagaa
cttttaaaatctgcaatgaaagctactgctactagcttagaaagttcaacagaaaagtct
ggcgcaagataccttcttaataataaggaaaaacacatagatactttttctgctgtaaac
actgatgatggaatttcccaaagaggggctaagctttttgaaggtgaggagattcatgag
agcacgtcaatatccagcggtggtgcttgtaagccaggatttgaactgagactaagtaaa
ataggcaaatttgatagaggaaataagaaaatattatgggttggtctgcaaagaagtcaa
caactgcaagccttgcataataaacttgaaactaatttatttaaagttggatacaataaa
gaagagcgaggctacaatccacatatcactttagctagagaagttagaatagaagcattt
gaccagttggcaaatgaaataaagctaaatgaaacttccatttgggtaaatgctatttca
cttatggagagtaaaagaattaataacaagctatgttatgtgcctatagagagagtggaa
tttgcaggcaagaaatag
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