Ruminiclostridium herbifermentans: EHE19_011565
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Entry
EHE19_011565 CDS
T07161
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher02010
ABC transporters
rher02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EHE19_011565
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
EHE19_011565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rher02000
]
EHE19_011565
Transporters [BR:
rher02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
EHE19_011565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
TraF_2
Cadherin_C_2
KAsynt_C_assoc
EntA_Immun
Motif
Other DBs
NCBI-ProteinID:
QNU65564
UniProt:
A0A4V6EN84
LinkDB
All DBs
Position
complement(2833580..2834674)
Genome browser
AA seq
364 aa
AA seq
DB search
MNRRNIYKERFSNSKDNSKTILIISLCFVSCMLLLTVGCLVYLNKLTENNKIELIGENYD
TFDNYYVLISNNRKSYFWKSVFEGAKDALDKNSYIEMLGNNLSMEYSTADLMRIAINSKV
DGIILEANESAEMTELINEANDANIPVITAVSDNNISTRKSFIGVNSYNLGLAYGQQVCN
IQKKLYGGKSKSSKTTVLVLMNKNSDNNMQNIVFSGIKDSIKNSEYQENIELETVAISNN
APFAAEESIRDIFIKEENIPDIIICMDEINTTCVYQGVVDYNKVGKTNIIGYHDTNTILT
AIDRNVIYSTITVDTEQIGMNCVKALEEYKKTGHVNAYFDVNISVITADNVKDYLGDTDE
TIND
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaagaaatatttataaagaacgtttttcgaactctaaagataacagcaaaact
attttaattatatcattgtgctttgttagctgcatgctcttattaactgtgggatgttta
gtatatttgaataagcttacagaaaataataagatagaacttataggagagaattacgat
acatttgacaactattatgtgcttatatctaataatagaaagtcatatttttggaaaagc
gtgtttgaaggagcgaaggatgctttagataaaaatagctatatagaaatgctggggaat
aatttaagtatggaatactccactgcagaccttatgagaatagctattaattctaaagtt
gatggaattattttggaggccaatgaaagtgcagaaatgacagaattaatcaatgaagca
aatgatgctaatattcctgtcattacagcagtaagcgataataatatcagtacaagaaaa
agctttataggagttaacagttataaccttggcttagcatatggtcaacaggtttgtaac
atccaaaaaaaactttatggcggcaaaagcaagtcttcaaaaactactgttttggtatta
atgaataaaaattcagataacaatatgcaaaatattgttttttcaggtataaaggatagt
attaagaatagtgaatatcaagaaaacatagaattagaaactgttgctattagtaataat
gcaccttttgctgcagaagaatctattagagacattttcataaaagaagaaaatattcct
gatataataatatgtatggatgaaataaatacaacctgtgtttatcagggagtagtagat
tacaacaaggttggtaaaaccaatataattgggtatcatgatacaaataccattttaacg
gctattgatcgtaatgtaatttattctaccattactgtagataccgagcaaattggtatg
aactgtgttaaggcattagaagagtataaaaaaacaggacatgttaatgcatattttgat
gtgaacatttcagtaattactgccgataatgtaaaagattacttgggagacactgatgag
acgattaatgattag
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