Ruminiclostridium herbifermentans: EHE19_011780
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Entry
EHE19_011780 CDS
T07161
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EHE19_011780 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_011780 (priA)
Enzymes [BR:
rher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHE19_011780 (priA)
DNA repair and recombination proteins [BR:
rher03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHE19_011780 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
M157_N_1
Zn_ribbon_6
SLFN-g3_helicase
Viral_helicase1
DAP3
TrwB_AAD_bind
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QNU65604
UniProt:
A0A4U7JDP9
LinkDB
All DBs
Position
complement(2896698..2899157)
Genome browser
AA seq
819 aa
AA seq
DB search
MNITTASIVLINATRAFDKKYTYVVPEDLIGQICVGCRVLVPFGNGSKVKEGFVLEINPQ
DNLEKSIEYKKIKSVLEPYPLLKEDNIKLLEWMKRQYICTYSDIIKCMLPPGISVKTIKK
VKLLNYDKSITYKKSNMNKIIHNLYCVGGECEYEQLRDMCGFKGFKGYIQELCELSAISI
VESYEQKVNAKYIKGVSLARPREEVIDELENNAVKKIQQVRVLEILLDNEIVSVADIKRF
AGVTASVLDTLSKYGYIKYFDIEVQRNPLSSKHYEKTEPLPPTAEQENALLLLKQKLDSK
AYKECLIHGITGSGKTEVYLQLISHCFEMGKKAIMLVPEISLTPQMVGRFVSRFGKRVAV
MHSRLSLGERFDQWRLISEGKVDVVVGARSAIFAPISNLGLIIIDEEHEGSYKSESTPKY
SAKEVAQKRCEINSTLLLYGSATPSVETYYRAVEGEIDLIEMKNRPKSAELPSVELVDMR
LELENGNRTPFSFRLMEELKKNIDNNQQSILFLNRRGFSTFVFCRNCGYTIRCPNCNIAM
TYHTKSNRLICHYCGFTVMNPAKCPSCESGNIRYFGIGTQKIEEEVKQRLPNSTVIRMDA
DTIGYKNSHEEILNRFKEENINVMVGTQMIAKGHDFPNVTLVGVLAADSMLNVSDFRSSE
RTFQLLTQVAGRAGRGEIGGRVIIQTYNTEDYSIIAARNQDYVKFYNQEILIRKRLGYPP
FSNIAIVVFNGRKDRAVFDAAKNIKQEVIEQGSSDIVILGPSRCPMPKIANKYRWRLVVK
AMDLDILIDELTKMSDGIWKKSKDDDVMMSIDINPYNML
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacaactgcatcaattgttctgattaatgccacgcgagcatttgataaaaaa
tatacatatgttgttcctgaagacctgataggtcaaatttgtgttggatgtagagtttta
gtcccctttggaaatggaagcaaggtaaaagaaggttttgtattagaaataaatcctcaa
gataaccttgaaaagtctatagaatataaaaaaattaaaagcgtattagagccatatcca
ctgctgaaggaagataatataaaactattggaatggatgaagagacagtatatttgtact
tattcagatataatcaaatgtatgcttccgccaggaataagtgttaaaactataaaaaag
gttaaactattaaattacgataaaagtataacctacaaaaaaagcaatatgaataaaatt
attcataatttgtactgtgtcggaggagaatgtgagtatgaacagctgagagatatgtgc
ggattcaaggggttcaagggctatatacaagagttgtgtgagttgagtgcaataagtata
gtagagagttatgagcaaaaggtcaatgcaaagtatataaagggtgtctctttagcaagg
ccaagagaagaagttatagatgaacttgaaaataatgcagtaaaaaaaatacaacaggtt
agagtactggaaatattactggacaatgaaatagtgtcagttgctgatattaaaagattt
gctggcgtaacagcatctgtattggatacgctgagcaagtatggctatataaaatacttt
gatatagaggtgcaaagaaatccattaagcagtaagcactatgaaaagacagagccactt
cctcctacagcagaacaggaaaatgctttattgctgttaaaacaaaagctggacagcaaa
gcatacaaagaatgcttaatacatggaataacaggcagcggaaaaactgaggtgtattta
cagttgatatctcactgcttcgaaatgggaaaaaaagctataatgcttgtgccagaaata
tcgttaactcctcagatggtagggagatttgtatctagatttggcaaaagagtagcggtt
atgcacagtagattgtcactaggagaaagatttgaccaatggagactgataagtgaggga
aaggtggatgttgtagtaggcgctcgctctgccatatttgccccaataagtaatttaggc
cttattattattgatgaggaacatgagggctcctataaatcagagtctacgcctaaatac
agtgcaaaagaagttgctcagaaaagatgtgaaataaacagtacactcctgttatatggt
tcagctactccttcagtagaaacgtattatagggctgttgagggggaaattgatcttata
gaaatgaaaaaccgcccaaagtcagcagaacttccaagtgttgaattggtagatatgagg
ctagaacttgaaaacggaaatagaactccgtttagcttccgactgatggaggagcttaaa
aaaaatattgataacaatcaacaaagtatactattccttaacaggcgagggttttcaact
tttgtgttttgcagaaattgcggatatactataagatgtccaaactgtaatattgcaatg
acttatcatacaaagagcaataggttaatatgtcattactgcggttttacagtaatgaat
cctgcaaaatgcccttcttgtgaaagtggtaatataagatattttggtattggcactcag
aagattgaggaggaagtaaaacaaaggcttcctaatagcacagtcattagaatggatgcc
gatacaataggctacaaaaattcacatgaagaaatacttaatcgttttaaagaagaaaat
ataaatgtaatggtgggcacgcaaatgattgctaaaggccatgactttcctaatgttact
ttggttggagtattagcagctgatagtatgctgaatgtaagtgactttaggtcgtcagaa
agaacctttcagctattgacacaagtggctggaagggctgggagaggtgaaataggcgga
agagttattattcaaacctataacactgaagattatagtattattgctgccagaaatcag
gattatgttaaattttataatcaagaaatacttattagaaaaagattgggttatccgcca
ttttcaaatattgcaatagttgtttttaacgggcgtaaggatagagcagtttttgatgct
gcaaaaaatataaagcaagaagttatagaacaaggctcttctgatattgttattttaggt
ccatcaagatgccctatgcctaaaatagcaaataaatatcgctggagactagttgtaaaa
gcaatggatttagatattcttattgatgagttaactaaaatgtcagatgggatatggaaa
aaatcaaaggatgatgatgttatgatgagcatagatattaatccatataatatgctataa
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