Ruminiclostridium herbifermentans: EHE19_013080
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Entry
EHE19_013080 CDS
T07161
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00550
Peptidoglycan biosynthesis
rher01100
Metabolic pathways
rher01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EHE19_013080
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EHE19_013080
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
EHE19_013080
Enzymes [BR:
rher01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EHE19_013080
Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EHE19_013080
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF4250
Motif
Other DBs
NCBI-ProteinID:
QNU65826
UniProt:
A0A4U7JE06
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All DBs
Position
complement(3218146..3219801)
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AA seq
551 aa
AA seq
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MHRRIRILLFIFLAVFSCLITRLFYIQIVGGNSMAKEASAQRSSNVNIESARGDFIDRNG
IRLTNRTPGITLVLKPALLRDQMSSVEQICRFVGLDVEKTKEKIQRYNTPILVEIDKETK
SILANMNIEGISFLNSLNRYNTDTKAKHLLGYLNKVDKIGINGLEKLYEKTLNYGHEDSL
AVITDSNNELLNGLGYRIIKGDDKTKKLDIRLTIDYHIQATIEEALDKRGLTGAIVVENV
NNGDIVAMCSKPDFDPNDIEKYLSNNKRPLFNRAVAQYNLGSVFKLIDLAAMFEKNPNFD
MIYNCPGYIQVGDKEFKCSSYEKGGHGTIEINSALALSCNSYFINMALDLGADPILSMCN
TLGLGNNTGLSLQGIDEAKGFVSPLSDIKNPGDIANVSIGQGQILATPVQIADLVATIAN
GGIKNNINVVDCVVNKEGNKVRDLKEISQKRVLSEVTAKRLKRLMEGVVSIGTGKQANLD
GYGGAGGKTGSAETGQYIDGEKIIQAWFAGYFPANAPKYSVAIFIEDGKSGGTAAAPIFA
EIGAEIMSKGL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaagaataagaatattactttttatatttttagcagtgttttcatgcctaatt
actagactattttatattcaaatagttggaggtaattccatggcaaaggaagcttctgca
cagagatcaagtaatgttaatatagaaagtgcaagaggagattttatagacagaaatggt
ataaggcttaccaacagaacgcctggaattactcttgttttaaaacctgcacttttgcgg
gatcaaatgtcttcagttgagcaaatatgcaggtttgtaggattagatgttgaaaaaaca
aaggaaaaaattcaaagatataatacacccattttagttgaaattgataaagaaacaaag
tctattcttgccaatatgaatattgaaggaatttcatttttaaattcactaaatagatac
aatacagataccaaagctaagcatttattaggctatttaaataaggtagataaaataggg
attaatggtttagaaaagctttatgaaaagacattgaattatggacatgaggattcgctt
gccgtaattactgatagtaataatgaactgctcaatggcctaggttacaggattattaaa
ggcgacgataaaactaaaaagctagatataagacttacaattgattatcatatacaggca
actatagaagaagcattggataaaagaggcctaacaggtgcgattgttgttgaaaacgtt
aataatggtgatattgtagctatgtgcagtaagcctgattttgatcctaatgatattgaa
aagtatttatcaaataataagagaccattgtttaacagagctgtggcccagtacaattta
ggctcggtatttaaattaattgatttggctgcaatgtttgaaaaaaatccgaattttgat
atgatttataattgtcccggatatattcaagtgggtgacaaggagtttaaatgttcatca
tatgagaaggggggacatggaactattgaaataaacagtgcattagcactttcctgcaat
tcttattttataaatatggcactggacttaggagcagacccgattttgtcaatgtgtaat
acattaggactaggtaataatactggattatctttacaggggattgatgaggcaaaagga
tttgtttccccattatcagatataaaaaatcctggagatattgcaaatgtttctattggg
cagggtcagatattagctacaccagttcagattgctgatttagttgccactatagctaat
ggtggaataaagaataatattaatgttgttgattgtgtggtaaacaaagaaggaaataaa
gttagagatttgaaagaaataagccaaaagcgagtactatcagaggtaactgccaaaaga
ttaaaacgtcttatggagggagtagtaagcatagggactggaaaacaggcaaatcttgat
ggttacggtggggcaggtggaaagactggaagtgctgaaactggacaatacattgatgga
gaaaaaataatacaagcatggtttgcgggttattttcctgcaaatgcaccaaaatattca
gtagcaatttttattgaagacggtaaaagtggaggaactgctgctgcacctattttcgct
gagattggtgctgaaataatgagtaaaggattatga
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