Ruminiclostridium herbifermentans: EHE19_013090
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Entry
EHE19_013090 CDS
T07161
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00300
Lysine biosynthesis
rher00470
D-Amino acid metabolism
rher01100
Metabolic pathways
rher01110
Biosynthesis of secondary metabolites
rher01120
Microbial metabolism in diverse environments
rher01230
Biosynthesis of amino acids
Module
rher_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
rher_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EHE19_013090 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EHE19_013090 (lysA)
Enzymes [BR:
rher01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EHE19_013090 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QNU65828
UniProt:
A0A4U7JBJ9
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Position
complement(3221357..3222601)
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AA seq
414 aa
AA seq
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MNDNDLQALAQKYGTPLYTYDGDKIISQFEKLKSCLPEEIEIFYSMKTNPLLGICQLFKK
LNSSIEVASSGELYTALSAGFSPQQIIFTSPGKTYEELEYAIEEQIYSINIESIDEAIII
NSIAAEKNKKVDISIRINPDFDATCSSIKMSGVPTQFGIDQALMGKAFDTFSQLPNINVI
GIHIYTGTQALYAEKIIFAMEQIISLALELSETYGFSLKFLDMGGGFGIPYFKGETELNL
EVLKEGVAQVWDKYKDRLVHTRVAVESGRFLMAESGMYLTKVIYTKECKGNKYIICDGGS
NHHASSAFLGRHIRNNFPMHVLNKSEAEEEVNVVGPLCTPTDVIGQKVKLPQIDVGDILA
IDKSGAYGLTQSPLAFLSHPSPAEVIQFGKESFVLRERGRKEDYIKGQNELNRK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataatgatttacaagctttggctcaaaaatatggtacaccgttatatacatat
gatggcgataaaattatttcgcaatttgaaaaactcaaaagctgcctgcctgaggagata
gaaatattttattccatgaagacaaatcctttacttggaatatgtcagctatttaaaaaa
ctaaatagttctatagaagtagcttctagtggtgaactttatactgcgctgtcagcaggt
ttttcgcctcagcagattatttttaccagcccgggtaaaacctatgaagaacttgaatat
gccattgaagaacagatatatagtataaatattgaatcaatagacgaagcaattattatt
aacagcatagcagctgaaaaaaataaaaaagtagatatttctataagaatcaatcctgat
tttgatgctacttgttctagtataaaaatgtcaggtgttccaactcaatttggaatagat
caggctttgatgggaaaagcatttgacacattttcacagctgcctaatatcaatgtaatt
ggaattcacatttatacaggaactcaagcattatatgcagagaagattatattcgctatg
gagcaaattatttcattagctcttgagttatcagaaacatatggattctcgttaaaattt
ttagatatgggaggcggctttggaattccttattttaaaggagaaacagaactaaactta
gaagttctaaaagaaggggttgcccaagtatgggataagtataaagatagattagtacat
acaagagttgcagttgaaagtggaagattcttaatggctgagtcgggtatgtatttgact
aaagtaatatatacaaaggaatgtaagggaaataaatacattatatgtgacggaggttca
aatcatcacgcttcgtctgcttttctaggacgacatatacgcaataatttccctatgcat
gtattaaataaatctgaagcagaggaagaggtaaatgtagtaggtcccctttgtacacct
acagatgtgattggacagaaagtgaagcttccccagattgatgttggagatattcttgca
attgataagtcaggtgcttacggtttaacacaaagtccattagcctttctcagccatcct
tcaccggcagaggttattcaatttggtaaagaatcgtttgtattaagagaaagaggaaga
aaagaagattatataaaagggcaaaatgaacttaatagaaaatag
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