Ruminiclostridium herbifermentans: EHE19_013295
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Entry
EHE19_013295 CDS
T07161
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00061
Fatty acid biosynthesis
rher00071
Fatty acid degradation
rher01100
Metabolic pathways
rher01212
Fatty acid metabolism
rher02024
Quorum sensing
rher04146
Peroxisome
Module
rher_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EHE19_013295
00071 Fatty acid degradation
EHE19_013295
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EHE19_013295
09145 Cellular community - prokaryotes
02024 Quorum sensing
EHE19_013295
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rher01004
]
EHE19_013295
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rher04147
]
EHE19_013295
Enzymes [BR:
rher01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EHE19_013295
Lipid biosynthesis proteins [BR:
rher01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EHE19_013295
Exosome [BR:
rher04147
]
Exosomal proteins
Exosomal proteins of breast milk
EHE19_013295
Exosomal proteins of breast cancer cells
EHE19_013295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QNU65864
UniProt:
A0A4U7JBN6
LinkDB
All DBs
Position
3278987..3280708
Genome browser
AA seq
573 aa
AA seq
DB search
MKTEPIYKQRKITDLKDMISQSVNLYGNRNAFYIKGSNGEYYGKTYNELKVEIDALGTAL
IDLGLKDKKIAILSENSQQWCTSYLTITCGVGVVVPLDRELPFNEIENLISRAGVSAIIF
SSKHEKDMLQLRQISNQIEYYINIDAETDKDNDLLSYSKLIEKGKILVQNGNRTYLDAEI
DENAMCALIFTSGTTDLAKGVMLSSKNIVSDIMAVCSMLTVDETDSSLSILPLHHTYECT
ANFLVMMYNGACFSFNEGLKHIVKNLQEVKPTVLMLVPLILENMHKKIIKQASKTKFGKL
KLNVALEISNFLYSFLKIDIRKKLFKQVHNIFGGRVRLVICGAAAVNPDVSNDLCSMGVR
IIQGYGLTECAPIVAVNNDHGYRDDSAGKPLAGVEVWLENVGDDGIGEIVVRGDNVMLGY
YENPVATQKVLKNGCLYTGDLGYIDEEGYIFITGRKKNVIVTKNGKNIFPEEVEAYLAKS
PYVKESLVWGRIDEESGETEVNAQIVIDMEEIKERLNVSTISMDEIYKLIQADVKEINKQ
MPLYKRIKNFTIREEEFIKTTTKKIKRYAENMS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgaaccgatttacaagcaaaggaaaattacagatctaaaagatatgatttct
caaagtgtaaatttatatggaaatagaaatgcattttacataaaaggtagcaacggtgag
tattatggcaaaacatataatgagttaaaggttgaaattgacgcacttggtactgctctt
atcgatctagggcttaaggataaaaagattgccatattgtcagaaaatagtcaacaatgg
tgtacctcttatttgacaattacttgcggtgttggtgtcgttgtccctttagacagagag
ttgccttttaatgaaattgaaaatcttatttcacgtgcaggggtcagcgcaataatattc
tcctctaagcatgaaaaagatatgctgcagctaaggcaaatatctaatcaaattgaatac
tatattaatatagatgctgaaactgacaaagataatgatttactttcatactctaagctt
attgaaaaaggaaaaatattagttcaaaatggtaacagaacttatttagatgctgaaata
gatgaaaatgcaatgtgtgcattaattttcacatcaggaactactgatttggcaaaagga
gtaatgctatctagcaaaaacattgtttctgatataatggcagtttgttcaatgttaacg
gttgatgaaactgatagttctttatctatcctccctcttcatcacacctatgaatgtact
gctaattttcttgttatgatgtacaatggagcatgcttctcctttaacgaagggttaaaa
catattgttaaaaatctgcaagaagtaaaaccaactgttttaatgctagttcctctaata
ctagagaatatgcacaaaaaaattattaagcaagcttcaaaaacaaaatttggaaaactt
aagcttaatgtagctcttgaaataagcaattttttatattcattccttaaaattgatatc
agaaagaagttgttcaaacaggtacataatatatttggcggaagagttcgattagtcata
tgtggtgccgctgctgtaaaccctgatgtttcaaatgatttatgcagtatgggagttaga
attattcaagggtatggtttgaccgaatgtgcgccaattgttgctgtaaataatgatcat
ggctacagagatgattctgctggaaaaccccttgcaggtgttgaagtatggcttgaaaat
gttggtgacgatggtatcggagaaatagttgtacgtggagacaatgtaatgctcggttat
tacgaaaatcctgttgcaactcaaaaggtacttaaaaacggttgtttatatactggagat
ttaggatatattgatgaagaaggatatatttttataactggaagaaagaaaaacgttatc
gttaccaaaaacggaaaaaatattttccctgaagaggttgaggcttacctagcaaaaagt
ccttatgtgaaagagagtttagtatggggccgcattgacgaagaatcaggcgagacagaa
gtaaatgcccagattgttattgatatggaagaaattaaggaaagacttaatgtgagcact
atttccatggatgaaatatacaagcttattcaagctgatgttaaagaaataaataaacaa
atgcctttatataagcgcattaaaaacttcactattcgtgaagaggaattcataaaaacc
acaacaaagaaaattaagcgatatgctgaaaatatgagttaa
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