Ruminiclostridium herbifermentans: EHE19_014405
Help
Entry
EHE19_014405 CDS
T07161
Name
(GenBank) discoidin domain-containing protein
KO
K01218
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00051
Fructose and mannose metabolism
rher01100
Metabolic pathways
rher02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
EHE19_014405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EHE19_014405
Enzymes [BR:
rher01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
EHE19_014405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F5_F8_type_C
F5_F8_type_C_2
CBM_X2
Cellulase
Dockerin_1
DUF6948
Motif
Other DBs
NCBI-ProteinID:
QNU66064
UniProt:
A0A4U7JJ43
LinkDB
All DBs
Position
3599952..3601886
Genome browser
AA seq
644 aa
AA seq
DB search
MKKLYFLLSALVLFFILTPLSNHASAETDSIYPGFRVKGRFLYDKAGEKVILYGINKMII
WMDKDGVPSFSEIAKTGANSVRIVWTTEGTAEELDTVIRNCRAEHMIPMVELHDATGEWH
KLQYLVDYWVRPDILEVIKKHQEYLLINIGNEVGNDVSAATFTADYSKHVKTMRAAGIHV
PLIIDASRYGQDIDILQSCGPDIIAADPDKNVMFSVHMWWPYMYGYTDQRVRDEIAQSVQ
MELPLIVGEFGHIWDETESGKIPYKVIIEECYKNEIGYLPWSWGPGNNPQTFLDMTTDGT
FATLQGWGLEVCMTSPYSINKIAKRPASMLANLPPVLPEEPLPAGNLALNKPVKASSVES
ALYSGSNITDGDKGTRWASSVSDNNWVYVDLGKKTEINKLIIVWEAAYATQYKIQVSDDE
TTWTDLFTQYNGTGKTETISLNGSGRYLRIYCSQRYKYDWPFSIFEIGVYGPESELSASI
SPTVAVYDKNPANQAAPSIIINPKANTLIKITTGDYTLVPNIDYTLTDNTLTFTNKYMSS
LPIGTAKFTLDFDGGVDPVFAVAIGDTTPVGSSNYSCGDYNKDGAVDALDFAHLKKLLMQ
GDPIDPADMYIYDLNLDNSIDALDFATLKMYLLGTITKLPYSSN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactttattttttattatcagctttagtattattttttatactgacgccttta
tctaatcatgcttccgcagaaactgattccatatatcccggtttcagagtcaaaggaaga
tttctttatgataaagcaggcgaaaaagtaattctttatggtattaataaaatgattatt
tggatggataaagacggtgttccatccttctctgaaatagctaaaactggtgctaattcc
gtcagaattgtttggacaacagaaggtacagcagaagaattggatactgttattcgcaat
tgtcgtgcagaacacatgattccaatggtagaacttcacgatgcaactggagaatggcac
aaactgcaataccttgttgattactgggtaagaccagatattcttgaagtaataaaaaaa
catcaggaatacttgctaattaacataggaaacgaagtaggaaatgatgtttctgcagct
acatttacggcagactattctaagcatgtaaaaacaatgagagcagcaggtatccatgtt
ccactgataattgacgcatctagatacggtcaggatattgatattcttcaaagctgtggt
cctgacattatagctgctgaccctgataaaaatgtaatgttttcagtacatatgtggtgg
ccttatatgtatggctatacagaccaaagggtaagagatgaaattgcacagtcagtacaa
atggaattaccattgattgtcggtgagtttggtcacatatgggatgaaacggaatcagga
aaaattccttataaggttattattgaagaatgctataaaaatgaaataggctatctccca
tggtcatggggtcctggaaataaccctcagacatttttagatatgactactgacggcaca
tttgccacactacaaggctggggcttagaagtatgcatgacaagtccatacagtattaac
aaaattgcaaaaagaccagcatctatgcttgcaaaccttccccctgtattacctgaagaa
cctttaccagcaggaaacttagcactaaataaaccagttaaggcttcctctgtagaaagc
gctctttattctggcagcaatattactgatggagacaaaggtacaagatgggcttcatcc
gtatcagacaacaattgggtgtatgtcgaccttggtaaaaaaactgaaattaacaagcta
ataatcgtttgggaagctgcatacgcaactcagtacaagattcaggtttcagatgatgaa
actacatggacagacctattcacacaatacaacggaactggtaagacagaaacaataagc
cttaatggttcaggacgttatttgagaatttactgttcacaaagatataaatacgattgg
cctttctcaattttcgagattggtgtatatggtccagaatctgagttaagtgcttcaata
tcacctacagtagcagtttatgataaaaatccagcaaaccaagctgctccttctattatc
ataaaccctaaagccaatactcttataaaaattacaacaggtgattacaccttagtgcct
aacatagattatacattaacagacaatacccttacatttacaaataagtatatgtcctct
ttaccaataggaacagcaaagtttactcttgattttgatggaggagtcgatcctgtcttt
gctgttgcaattggagatacaaccccagtaggaagttctaattattcatgcggagattat
aacaaagatggcgctgttgatgcacttgattttgctcatttgaaaaagcttcttatgcaa
ggagatcctatagaccctgcagatatgtacatatatgatttaaaccttgacaatagtata
gatgcacttgattttgcaacccttaagatgtatctattagggacaattacaaaattacca
tactcttcgaattaa
DBGET
integrated database retrieval system
