KEGG   Ruminiclostridium herbifermentans: EHE19_015180
Entry
EHE19_015180      CDS       T07161                                 
Name
(GenBank) SAM-dependent methyltransferase
  KO
K03701  excinuclease ABC subunit A
Organism
rher  Ruminiclostridium herbifermentans
Pathway
rher03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rher00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EHE19_015180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rher03400]
    EHE19_015180
DNA repair and recombination proteins [BR:rher03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EHE19_015180
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EHE19_015180
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran TrmO_N SMC_N AAA_21 nSTAND1 AAA_29 RsgA_GTPase AAA_16 nSTAND3 ATPase DnaJ_CXXCXGXG Anti-TRAP AAA_23
Other DBs
NCBI-ProteinID: QNU66208
UniProt: A0A4V6EP10
LinkDB
Position
complement(3794232..3797525)
AA seq 1097 aa
MKKVEFQHIGDYFSDPEGSQIRITIKRDLKDALLKLDHFSHCVIFTKGNQGFHCYIAKIV
DIRQKTGELIIESYNQLKGELVDIKPYFPCEEKVDKYNKEIVVREEDFDPLFFRGEPIGK
YFSAHDGGIIQFQESENLSAEAIERVIKHIKEGTFLRVIWWFDRFDDKRYRSCLVCNPPY
DNAPKCGVFATRSPVRPNPIASTVVKVKSTDQYNKSITVLGFDGFSDTMILQVIPYQETD
ISGIKVPKWVEHWTDCKVFYDINKIELCSDDHSNAVYNKATEYFEELECNEIGQETEDLN
EIVVEGASIHNLHNINVRIPKEKITVITGVSGSGKSSLAFDTIYYESQKQFLDLISSNTL
TGTELKDSRVKKITGLQSSIAIEQKSLGANPRSTVATVTGIGEFLRLLFATIGDRICPNC
LKAVPENNVCNFCGAIFLTLTPAVFNYNNPDYMCPVCKGLGEELQADINLIVTNPELSIL
DGASPWWGNLRKHREKPNANWMKGEVLALAEDMNEDLEVPFKDLSEEFKNQIFYGSNGRM
VTWSYVNPNGRSGTITRPVEGVVNILKRLLAENRTSGSIEHIKRFFVNKKCSRCKGERLL
EEGRLVKIGDTRYPEAVSMSITTLRNWCHFIYGNLNEINREKCRDILRKIVTRLKKLEEV
GLGYITLDRSIPSLSGGEAQRVKLANQLGTGLSNILYIMDEPSKGLHPKDFQFLIPAIRH
LKRLRNTVIVVEHRKEFIQMADYLIEIGPGAGNYGGQLLYSGMGEQQMFYDAKNYEYSVK
SAAVEEDEKILLKGARTNNLKSIDISIPLKKMVCVIGVSGSGKSSLVSKTLYPAILKALG
MSVEVVGEYDSISGIDGISNLYYVSQKPIGKNSRSTPGTYTGVFDLIRNYYAELSEAKKA
KLTKEYFSFNSQKGQCEACKGAGEIAIPMHFMQDIYVPCHKCKGKRYKESVLKIKYKGYS
IGDLLDLEIREVGEIFKNQPAIYRVLDMLCKVGLSYIKFGQSAATLSGGEAQRIKLAKEL
CDGKTEGAIYILDEPTSGLHDNDIDKLCYIIRELTSKGATVVIIEHNPRIINQADYIIEL
GPGGGENGGFLLKEGWI
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgaaaaaggttgagtttcagcatataggtgattatttttctgatcctgaaggcagccag
ataaggattacaattaaaagagacttaaaagatgcattgctcaaattagaccattttagt
cattgcgttatatttacgaagggaaatcaaggctttcactgttatatagcaaagatagta
gatataaggcaaaaaactggtgaattaatcattgaatcctataaccaactgaaaggtgaa
ctggtggacattaagccctattttccttgcgaagagaaagtggataaatacaacaaggag
atagtagtgagggaagaagactttgacccattgtttttcaggggggaaccaattggaaag
tatttcagcgctcatgatggtggcattattcagtttcaagaatcagaaaatctctcagcc
gaggcaattgaaagagttattaagcatataaaagaaggaacttttctgagagtgatatgg
tggtttgaccgttttgatgataaacggtatcgaagctgtttggtatgtaatcctccctat
gacaatgctcctaagtgcggtgtatttgctacaaggtcacctgtaaggccaaatcctatt
gcttctactgttgtcaaagttaaatctacagatcagtataataagagtattacggttttg
ggctttgatggtttttcagacactatgattttgcaagttatcccatatcaggagacagat
ataagcggtataaaggttccaaagtgggttgaacactggaccgattgtaaagtgttttac
gatattaataagatagaactatgtagcgatgaccatagcaatgcggtttataataaagct
acagaatattttgaggaactggaatgtaatgaaattggacaggaaactgaagatttaaat
gaaattgtcgttgaaggtgcctcaattcacaatctgcataatataaatgttaggatacca
aaagagaaaattacggttataacaggcgttagcggaagcggaaagtcaagccttgctttt
gacactatctattacgaaagtcagaaacagtttttggatttaatttcatctaatacatta
acagggactgagttgaaagattccagagttaagaaaattaccggacttcagtcttctata
gctattgaacagaaaagcttgggagcaaatccgagatcaaccgttgccactgttacagga
ataggagagtttctaaggcttttgtttgctaccattggggataggatttgccctaattgt
cttaaagctgttccggagaataatgtatgcaatttctgcggtgcaatttttctaacactt
actccagctgtattcaattataataatcctgactacatgtgccctgtctgtaaaggcctt
ggagaggaacttcaggcagatattaatcttattgtaacaaaccctgaattgtctattttg
gatggcgcttctccatggtggggaaatttgagaaaacacagagaaaagcctaacgcaaac
tggatgaagggagaggttctggcactggcagaagatatgaacgaggatctggaagttcct
tttaaggatttatcagaagaattcaaaaatcaaattttctatggcagtaatggacgaatg
gtgacttggagttatgtgaatcctaatggaagaagcggaaccataaccagaccggtggaa
ggggttgtcaatatacttaaacgcttattggctgaaaatcgtacatcgggctctattgaa
cacattaaaagattttttgtaaataaaaaatgcagcagatgtaaaggcgaaaggctgctt
gaagaaggccgactggtaaagataggggatacaagatatcctgaagcagtcagcatgagt
ataaccactctgagaaattggtgccatttcatatatggaaatctaaatgaaatcaaccgt
gaaaagtgcagagatattttacggaagatagtcacaagactcaaaaagcttgaagaggtt
ggacttggatatatcactctagacagaagtataccgtccctttctggtggtgaggcacaa
agagtaaagcttgcaaatcaattgggaacaggtctttccaatattctgtatatcatggat
gagccttcaaaaggtttgcatcctaaagattttcaattcctgattccagctattcgccac
ctaaaaaggttgagaaacacagttattgttgttgaacatagaaaagaatttattcagatg
gcggactatctaattgaaataggacctggtgcagggaattatggcggacagttattatac
tcaggtatgggtgaacagcaaatgttttatgatgctaagaattatgaatactctgttaaa
agtgctgccgttgaagaagatgaaaaaatactgttgaaaggtgcaagaacaaataatcta
aaaagtattgatatttctatacctctcaagaaaatggtatgtgtcataggagtgagcggg
tccggaaaaagcagtcttgtatctaagacattatatccagctatattaaaggctcttggt
atgagtgtggaggttgttggagagtatgacagtatttcagggattgatggtatatctaat
ttatattatgttagccaaaagcctattgggaaaaattccagatctaccccaggaacatat
acaggagtatttgacttaatcagaaattattatgctgaactaagtgaggcaaaaaaagca
aaactgacaaaagaatactttagctttaacagtcagaagggacagtgcgaagcatgcaaa
ggagctggcgaaatagccattccaatgcattttatgcaagatatttatgttccctgtcat
aaatgcaaaggtaagagatataaagagtctgtattgaaaataaagtataaagggtattca
attggagacttacttgatttagagataagagaagtcggagaaatattcaagaaccaacca
gctatatatcgagtattggatatgctctgtaaggttgggctttcatatatcaaattcgga
caaagtgctgcaacattatcaggtggtgaagcccaaagaataaagttggcgaaagaatta
tgcgatggaaaaacagaaggtgcaatttatatactggatgaacccacttcagggctccat
gacaatgatatcgataagctgtgctatattattcgtgaacttacctccaagggagcaaca
gttgttatcattgaacacaatcctagaattatcaatcaagcagattatataatcgaattg
ggacccggaggcggagaaaatggagggtttttattaaaggaaggatggatataa

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