Ruminiclostridium herbifermentans: EHE19_018710
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Entry
EHE19_018710 CDS
T07161
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher03420
Nucleotide excision repair
rher03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHE19_018710
03430 Mismatch repair
EHE19_018710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_018710
Enzymes [BR:
rher01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHE19_018710
DNA repair and recombination proteins [BR:
rher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHE19_018710
MMR (mismatch excision repair)
Other MMR factors
EHE19_018710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
DEAD
PhoH
ResIII
SLFN-g3_helicase
AAA_30
NACHT
Motif
Other DBs
NCBI-ProteinID:
QNU66835
UniProt:
A0A4U7JC31
LinkDB
All DBs
Position
complement(4609849..4612131)
Genome browser
AA seq
760 aa
AA seq
DB search
MSAANHPAYKEELERCRYTLDYVKKSLERAIEKRKKVGNELDNVQRHMSGDSSADYTSIM
VNTLIHDALALKIKNLHTAKSKPYFARIDFLEDDTKKIEKLYIGKMSLARDEDQEIIIVD
WRAPIANLYYEGRLGASSYECPDGTIEGQLLLKRQFSINNGELEEIFDIDITTNDEFLQT
YLGANAENRLKEIVSTIQEEQNKIVRAPMWKPLIVQGVAGSGKTTIALHRIAYLIYTFEK
SFEPENFMIIAPNRLFLNYISEVLPELGVERVNQTTFEDFSMELIGKKFKLTDSNYKLNK
FVNYNTTDEQISNNNLIRQASIVKTSMYFKDIIDEYIKIIEFSFIPKQDIMLGTKVIFTY
EEINNLFTTQYAMWPIAQRMNEIKKSITTRLKASKQDFISQIEFECDRKIAKIRASKIDE
KEKQELVIKAFEKRDRVIGKIEKVTKTLVKEYLDTLPKISPYQYYIDLMKNADTFDSIAS
KYIDKEVCKFTREYTLSVLNNKMLELEDLAPIIYLKYKIYGMDEKIPVKHIVIDEAQDFS
AFQFFVLKKIVKDSSFTILGDLCQGIHSYRGVRSWEEIVENVFEGKKCEYLTLEQSYRTT
IEIMDAANNVIDKLQNSELLKGKPVIRHGEPVEIISKSDIDETAKDICQKIIESKAKGHK
TIAVICKTSEECELFLPLLKRADKDITVITGNEKEYKSGIVIVPSYLSKGLEFDVVLISN
ANRHNYTENELDVKLLYVAMTRPLHKLLIYYVGEKTKLLD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgcaaaccatccagcctataaagaagagctagaaaggtgcaggtatactttg
gactatgtgaaaaaaagtcttgaacgcgctatagaaaaaagaaaaaaggttggaaatgag
ttagataatgttcaaagacatatgtctggtgatagtagtgcagactacacaagtatcatg
gttaatactttgattcatgatgcgttggcattaaagattaaaaacctgcatactgccaaa
agtaagccatactttgctagaattgattttcttgaggacgatactaaaaaaattgaaaag
ttatacattgggaaaatgtcacttgcaagagacgaagatcaggaaataataattgttgac
tggagggctccaattgcaaacttgtactatgaaggaagattaggggcatctagctatgaa
tgtcctgatgggactattgaggggcaacttcttttaaagagacaattttcaattaataat
ggagaattagaagaaatatttgatattgatataactactaatgatgaatttttacaaact
tatcttggagctaatgctgaaaacaggctaaaagaaattgtttctactattcaagaagag
caaaataaaatagtaagggcacctatgtggaaacctcttatagttcaaggcgtagcaggt
agtggtaaaacaacaattgctctccatagaattgcatatcttatttatacctttgaaaaa
agttttgagcctgaaaattttatgataattgctcctaatagactttttttaaactatatc
tcagaggtattaccggaacttggagtagaaagagtaaatcaaactacatttgaagatttt
tcaatggagttaatcgggaaaaagtttaaactcacagattcaaattacaaactcaataag
tttgttaattataataccacagatgaacagatttccaataacaatttaataagacaggct
tctatagtgaaaacatcaatgtactttaaagatataattgatgagtatatcaagataatt
gagttttcatttattccaaaacaggacataatgttaggcacaaaggtgatatttacttat
gaagaaataaataatttgtttacaacacagtatgctatgtggccaatagcacaaagaatg
aatgaaattaaaaagagcattactacaaggcttaaggcaagcaaacaggattttatttct
cagatagaatttgaatgtgataggaagattgcaaagattagagcgtcaaaaattgatgaa
aaagaaaaacaagaattggtcattaaagcatttgaaaagagagacagagtaattggaaaa
attgaaaaagttactaagactttagttaaggaatatttagataccttacctaaaataagt
ccataccagtattatatagatttaatgaagaatgcggatacatttgatagtatagcgagt
aaatatattgataaagaggtatgtaagtttaccagagaatatacactgagtgtattaaat
aataaaatgttggagcttgaggacttagcaccaataatatatttaaaatataagatatat
ggaatggatgaaaaaattcctgttaaacatattgtaattgatgaagcacaagatttcagt
gcctttcaattttttgtgttaaaaaagatagttaaagatagttcatttactatattagga
gatttatgccaagggatacattcatatagaggcgttcgtagctgggaagaaattgtggag
aatgtttttgagggaaaaaagtgtgaatatttaactcttgaacaaagctacagaactaca
attgaaataatggatgctgcaaataatgtaattgataaattacaaaatagtgaactgctg
aaaggaaaacctgttataaggcatggagaacctgttgaaataatatctaaatcagatatt
gatgaaactgcaaaggatatatgtcaaaagattatagaatcaaaagcaaaaggacacaaa
acaattgcagtaatatgcaaaacaagtgaggaatgtgaattatttctgcctcttctaaaa
agggctgacaaagacataactgttattactggaaatgaaaaagaatataaaagtggtatt
gtgattgtaccttcatacctatctaaaggattagaatttgacgtagtacttatttcaaat
gctaacaggcataattatactgaaaacgaattagatgttaaattgttgtatgtggcaatg
actagaccacttcataaacttttaatttactatgtaggagagaagactaaattgcttgat
tag
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