Rodentibacter caecimuris: FEE42_00080
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Entry
FEE42_00080 CDS
T06473
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey03030
DNA replication
rhey03430
Mismatch repair
rhey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEE42_00080
03430 Mismatch repair
FEE42_00080
03440 Homologous recombination
FEE42_00080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhey03032
]
FEE42_00080
03400 DNA repair and recombination proteins [BR:
rhey03400
]
FEE42_00080
Enzymes [BR:
rhey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEE42_00080
DNA replication proteins [BR:
rhey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FEE42_00080
DNA repair and recombination proteins [BR:
rhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FEE42_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_5
AAA_22
AAA_14
ResIII
AAA_18
AAA_16
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QIA75876
LinkDB
All DBs
Position
18633..20711
Genome browser
AA seq
692 aa
AA seq
DB search
MSYQVLARKWRPQTFDEVVGQGHIITALSNGLKEQRLHHAYLFSGTRGVGKTSIARLFAK
GLNCIKNGITDHPCGECENCKAIEQGSFIDLIEIDAASRTKVEDTRELLDNVQYKPVVGR
FKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCMQFHLKALD
EQQISQHLAYILTQENIPFEPLALDKLAKAAQGGIRDSLSLTDQAIAMGDRHVTVNVVNA
MLGLLDDTQAIDIIYALHQGNGERLMRVLQTVSEKAGDWDQLLAEVAEKLHQIALMQLLP
QNTASENEHLTFLAKYISPEDVQFFYQVIVSGRKELSAAPNYRVGVEMTLLRALAFHPKF
LTATPKANLSAEAALSVGKGAAENSGNYIDMPVLSQNIKSNYKKTKSVQPTSSKHKETNF
VGLAALEALKQLDQIETSERQARQKEMDEAVNKAIHQVQTLDEQKIQRKMTALPVREMTP
PKKVVQSGSKNVSEIPKNVQTMMNIVEDHSDLEQEEREIIEAENYRWEWSNPELAKETLT
IAPSDIKQAILKDITPELNSRIIEMTQTQDEWANIVESSGVSGFSKELALNCFLLDKTEE
KIYLGLHSTKAHLRQERSIHLLAEALSQFYEKLITIDIQLDDRDSATPMVYRKKIYQDLR
EQARDELQQDKKLLLLQKEFDAKLDIESIRPV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttttagcccgaaaatggcgtccccaaacctttgatgaggtagtcgga
caagggcatattattaccgcactttctaatggattaaaagagcagcgacttcatcatgcc
tacctgttttcgggtacgcgcggcgtgggaaagacttctattgcccgccttttcgctaaa
ggcttaaattgcattaaaaacggtattacggatcatccgtgtggcgaatgtgaaaattgc
aaagccattgagcaaggctcatttattgatcttattgagattgatgcggcttcacggaca
aaagtggaagatacgcgcgagttactggataacgtgcaatacaaaccggtggttgggcgt
tttaaagtgtatttaattgatgaagtgcatatgctatcgcgtcattcttttaatgccctg
cttaaaaccttggaagagccgcctgagtatgtaaaatttttgcttgctaccacggatccg
caaaaactgccggtaacaattttatcccgttgtatgcaatttcatctgaaagcgctggat
gaacagcaaatttcacaacatcttgcatatattctcacccaagaaaatattccttttgag
ccattggctttagataaattggcgaaagcggctcagggtggaattcgcgatagtttaagc
ttaacggatcaagctattgcaatgggggatcgccatgttacggtaaacgtggtgaatgca
atgttaggcttacttgatgatactcaagccattgatattatttatgccctgcatcaggga
aacggtgaacgtttgatgagagtgcttcaaactgtttctgaaaaagccggtgattgggat
caattattggcggaagtggcggaaaaacttcaccaaattgcgttaatgcagctattgcca
caaaatacggcgagtgaaaacgaacacctcacatttcttgcaaaatatatctcaccggaa
gatgttcaatttttctatcaagtgattgtttccggtagaaaagaactgagtgctgcaccg
aattatcgtgtaggcgtggaaatgacattattgagggcattggcatttcacccaaagttt
cttacggcaacacctaaggcgaatttatctgccgaggcggcactttctgttggaaaaggt
gcggctgagaattcgggcaattatattgatatgccggtgttgtcgcaaaatattaaatcc
aactataagaaaacgaaatccgttcaacctacttcctcgaagcataaagaaacaaatttt
gtcggactggcggcattagaagccttaaaacaacttgatcaaattgaaacgagtgaacga
caagcccgtcaaaaagaaatggatgaggcggtgaataaggcaatacatcaggtacaaaca
cttgatgaacaaaaaatacagcgaaaaatgaccgcacttcccgtgcgtgaaatgacacct
cccaaaaaagtagtgcagtcaggttcaaaaaacgtgtcggagatacccaaaaatgttcaa
actatgatgaacatagtggaagatcattctgacttggaacaggaagagcgggaaattatt
gaggcggaaaattatcggtgggagtggagtaatcccgaattggcaaaagagacgctaacc
attgcaccttccgatattaaacaagccatactgaaagatattactccggagttgaattcc
cgtattattgaaatgacacaaacccaagatgaatgggctaatattgtggaaagttcggga
gtgagcggtttttcgaaagaattggcattaaactgctttttattggataaaaccgaagaa
aaaatctatctggggcttcattcaacaaaagcgcatttacgccaagaacgtagtattcat
ttattggcagaagcactgagccaattttatgaaaaattgataaccattgatattcaattg
gatgatcgggatagtgcaacgccaatggtttatcgtaaaaaaatttatcaagatttacgg
gaacaagcccgtgatgaacttcaacaggataaaaaactccttctcctacaaaaagaattt
gatgcgaaattagatattgagagtattcgtcctgtttag
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