Rodentibacter caecimuris: FEE42_00145
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Entry
FEE42_00145 CDS
T06473
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FEE42_00145 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhey01007
]
FEE42_00145 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhey03016
]
FEE42_00145 (serS)
Enzymes [BR:
rhey01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FEE42_00145 (serS)
Amino acid related enzymes [BR:
rhey01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FEE42_00145 (serS)
Transfer RNA biogenesis [BR:
rhey03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FEE42_00145 (serS)
Prokaryotic type
FEE42_00145 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
MG280
Motif
Other DBs
NCBI-ProteinID:
QIA75889
LinkDB
All DBs
Position
30959..32248
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AA seq
429 aa
AA seq
DB search
MIDPNLIRNNLAEVAEKLKIKRNFILDTEKLVALEEQRKTLQVKTETLQAERNTRSKAIG
AAKARGEDIAPLLAEVDNMGNQLNEAKTQLDEVLAEINQIALTIPNLPADEVPLGKDDSE
NLEILRWGTPRIFDFEIKDHVTLGEQIDGLDFAAGAKLAGARFAVMKGQIAKMHRALAQF
MLDLHSEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTNALEGEQPYALIPTAEVPV
TNLVRDVILDDAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSM
EALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQDTYREISSCSNM
WDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSVTVPEVLRPY
MGGLEVIGK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgattgatccgaatctaatccgcaataatttagcggaagttgcagaaaaactaaaaatt
aaacgtaacttcattcttgataccgaaaaacttgtggcgttggaagaacagcgtaaaacg
cttcaagttaaaaccgaaactttacaggcggaacgtaatacccgatcgaaagctatcggg
gcggcaaaagcccgtggtgaggatatcgccccgttacttgccgaagtcgataatatgggc
aaccaattaaatgaagcgaaaactcaattagatgaagttttagcggaaatcaatcaaatt
gcattaactattccaaatttaccggcagatgaagtgccgcttggtaaagacgattcggaa
aacctcgaaattttacgttggggaacgccaagaatttttgattttgaaattaaggatcat
gttactttaggcgagcaaattgacggtttggattttgccgccggagcaaaattggcgggg
gcgcgttttgctgtgatgaaagggcaaattgctaaaatgcatcgtgctttagcccaattt
atgttggatcttcactctgaacaacatggttatttagaaacctatgtgccttatttggtg
aatcatgcaactctttacggtacagggcaattaccaaaatttggtgaggatttatttcac
accaatgccttagaaggtgagcagccttacgcattaattccaacggcggaagtaccggta
acgaatttagtccgtgatgtgattcttgatgacgcagaattgccgatcaaaatgaccgca
catacgccatgtttccgttcagaggcaggatcttacggacgtgatacaagaggattaatt
cgtatgcaccagtttgataaagtggaaatggtgcaaattgttgatccggataaatcaatg
gaagcccttgaagaattaaccggtcatgcggaaaaagtattgcaattgctcaatcttcct
tatcgtaaagtattactttgtaccggtgatatgggctttggttcttgtaaaacctatgat
ttggaagtgtgggtgccggcacaggatacttatcgtgagatttcttcttgttctaatatg
tgggatttccaagcccgtcgtatgcaagcccgctgcaaagcaaaaggcgataagaaaacc
cgtttagtgcatacgttaaatggctcggggttagcagtagggcgtacgttagttgccgta
cttgaaaactatcaaaatgccgacggctcagttaccgtaccggaagttttgcgtccgtat
atggggggattagaggttatcggcaaataa
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