Rodentibacter caecimuris: FEE42_00330
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Entry
FEE42_00330 CDS
T06473
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhey
Rodentibacter caecimuris
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhey03032
]
FEE42_00330 (gyrA)
03400 DNA repair and recombination proteins [BR:
rhey03400
]
FEE42_00330 (gyrA)
Enzymes [BR:
rhey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FEE42_00330 (gyrA)
DNA replication proteins [BR:
rhey03032
]
Prokaryotic type
DNA Topoisomerases
FEE42_00330 (gyrA)
DNA repair and recombination proteins [BR:
rhey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FEE42_00330 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
Motif
Other DBs
NCBI-ProteinID:
QIA75922
LinkDB
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Position
complement(71177..73819)
Genome browser
AA seq
880 aa
AA seq
DB search
MTDSIQSSITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTA
NKKYVKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAA
MRYTEVRMQKITQALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMA
TNIPPHNLNEILNGCLAYIDNNDITIDELMQYIPGPDFPTAALINGRKGIEEAYRTGRGK
VYVRARATVETNDKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEG
IRIEIDIKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRRE
VVTRRSIFELRKARERTHILEGLAVARSNIDEMIAIIRNSKNREEAANAISSRSWALHSD
IINLLDITARPDDLEENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVVKEYQELLI
KIADLLHILGSAERLMEVIREELEEVKSQFGDERLTEITTASGDIDLEDLIAQEDVVVTL
SHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWLK
VYQLPQASRGARGRPIVNILPLQENERITAILPVSAYEEDKFVVMATAGGIVKKIALTEF
SRPRSSGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFSETAARAMGRLATGVRG
IKLALTNDISEDESAVEIDEVSDENTEDTLDLNIDKVVSLVIPKGEGAILTATQNGYGKR
TQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSIV
GRNTQGVRLIRTAENENVVSLERVCDVDEEELSQDSDAEQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgacggattcaattcaatcctcaattacccctgtcaatattgaagaagaactcaaatcc
tcctatcttgactatgccatgtctgtgattgtcggacgagctttacctgatgtacgtgac
ggtttaaaacccgtacatcgtcgcgtattattttcaatggatcgcgagggcaatacggca
aataaaaaatatgtcaaatcggctcgtgtcgtcggggacgttatcggtaaatatcaccct
catggtgattctgccgtgtattacactatcgtccgtatggcacaaccgttctcactgcgt
tatatgttggtggacgggcaaggtaactttggttcgattgatggtgatgcgccggcggcg
atgcgttataccgaagtgcgtatgcaaaaaattacccaagcgttgctcacggatttagat
aaagaaaccgtcaatttctcgccaaactatgatggcgaattaatgattcctgatgtattg
cctacccgtattcctgcattgcttgcaaacggatcatccggtattgcggtagggatggca
accaatattccgccacataacctcaatgaaatattaaacggttgcttggcttatattgat
aacaacgacatcactattgatgaattaatgcaatatattccggggccggacttccctact
gctgctctaatcaatggtcgtaaaggtattgaagaagcctatcgtaccggtcgtggtaaa
gtctatgttcgcgcacgggcgactgtcgaaaccaatgataaaggtcgcgaacaaattatc
gtgtctgaattgccttaccaagtaaacaaggcaaaactggtggaaaaaatagccgagctt
attcgcgagaaaaaaattgaaggtatcagcaatatcaccgatctttccaacaaagaaggg
attcgcattgagatcgatatcaaacgtgatgcagtcggtgaagtggtattaaaccatctt
tactctctcactcaaatgcaggtaacctttggcatcaatatggttgccttggatcacggt
cagccgcgtttattcaatcttaaagaaatcattgaagcctttgtgttgcaccgccgtgaa
gtggtaacccgccgctccatttttgaacttcgtaaagcacgtgaacgtacccacatttta
gaagggttagcagtggcgcgttctaatattgatgaaatgatcgccattatccgtaattcc
aaaaaccgagaggaagccgctaacgctataagttctcgttcttgggcattgcacagcgat
attatcaatctacttgatatcactgcccgtccggacgatcttgaggaaaacctaggcatt
cagggcgaacaatattatttatctccggcacaggtcaatgcgattttagaacttcgctta
caccgtttaaccggcatcgcttttgaagaagtggtgaaagaataccaagaattattgata
aaaattgccgaccttcttcatattttgggcagtgccgaacgcttaatggaagtgatccgt
gaagaattggaagaagtgaaatcacaatttggtgacgaacgtttaacggaaatcaccacg
gcttcgggtgatattgacttagaagatcttatcgctcaagaagatgtggtggttacactt
tcccacgaaggttacgtgaaatatcaaccgctaaccgattatgaagcgcaacgccgtggc
ggtaaaggaaaatctgctacgaagatgaaagaagaagatttcatcgaaaaactactggtt
gccaatacccatgatacgattctctgtttctcaagccgcggacgattatattggctaaaa
gtgtatcaacttccacaagccagccgtggggctcgcggtcgtccaattgtgaatattctg
ccattacaagaaaatgaacgtatcaccgccattctgccggtttctgcctatgaagaagac
aaatttgtggtgatggcaacggcaggcggtattgtgaagaaaatcgccctcactgaattt
agccgcccacgttcaagcggtatcattgccttgaatttacgtgatgaagatgaactgatc
ggcgtcgatattacggacggcagcaatgaaattatgttgttctcgtctcaaggtcgtgtg
gtgcgtttctctgaaactgccgcgcgtgcaatggggcgtttagcaaccggagttcgtggc
attaaactcgccctaacaaacgatatttcagaagacgaaagtgcggtcgaaattgacgag
gtttccgatgaaaacacagaagataccttagatctcaatatcgacaaagtagtttccttg
gtcattccaaaaggtgaaggcgcgatcttaaccgccacacaaaacggttacggtaaacgc
actcaattaagcgaatacccgacaaaatcacgcaataccaaaggggtgatttctatcaag
gtgagcgaacgcaacggtaaagtggttgccgcaacccaagtggaagaaactgatcaaatt
atgctaatcactgatgccggtacgcttgttcgcacccgtgtaagtgaagtcagtattgtg
ggccgtaacacacaaggtgtgcgtttaatccgtaccgcagaaaatgaaaatgtggtgagt
cttgagcgcgtatgtgatgtagatgaagaagaactatcacaagatagcgatgccgaacaa
taa
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