Rodentibacter caecimuris: FEE42_01115
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Entry
FEE42_01115 CDS
T06473
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K07733
prophage regulatory protein
Organism
rhey
Rodentibacter caecimuris
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhey03000
]
FEE42_01115
Transcription factors [BR:
rhey03000
]
Prokaryotic type
Other transcription factors
Others
FEE42_01115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_AlpA
HTH_17
HTH_11
DUF7123
TrmB
TetR_N
HTH_3
HTH_50
HTH_31
Phage_CI_repr
HTH_22
HTH_23
Sigma70_r4_2
HTH_28
HTH_10
Sigma70_r4
HTH_24
HTH_36
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QIA76055
LinkDB
All DBs
Position
complement(229774..229962)
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AA seq
62 aa
AA seq
DB search
METNQIYFNAREIAEKLGVSRSGIYSLMRSSHFPAPIKIGRLSRWKVADVTQWLNERKTA
NG
NT seq
189 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaaccaaatctattttaatgcgcgtgaaatcgctgaaaaattgggcgtaagc
cgcagcgggatttattcccttatgcgttctagtcattttccggcaccaattaagatcggg
cgtttaagccgttggaaagtggcagacgtaactcaatggctaaacgaaaggaaaaccgcc
aatgggtaa
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