Rodentibacter caecimuris: FEE42_02115
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Entry
FEE42_02115 CDS
T06473
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhey
Rodentibacter caecimuris
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhey03016
]
FEE42_02115 (truB)
Enzymes [BR:
rhey01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FEE42_02115 (truB)
Transfer RNA biogenesis [BR:
rhey03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FEE42_02115 (truB)
Prokaryotic type
FEE42_02115 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QIA76235
LinkDB
All DBs
Position
complement(412675..413595)
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AA seq
306 aa
AA seq
DB search
MSRPRKRGRDIDGVFLLDKPQGMSSNEIMQKVKRLFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYLVTAKLGERTDTSDADGQVVETRAVNVETPQILTALEQFRGDIL
QVPTMFSALKHQGKPLYEYARQGITVEREARPITIFELKFIEYHAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTMLRRLAVADYPIEAMMSWQELQYLAEKQELALLDQHLLPTDT
AVSKLPALHLNEAQSRAIGFGQRVKFTNDQNLQGQVRLFSAQNLFLGVALIDGDIIRPQR
LITQSA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaccacgcaagaggggacgtgatattgacggcgtttttttgttggataaaccc
cagggaatgtcctctaacgaaattatgcaaaaagtaaaacgtctcttccaagccaataaa
gcagggcatacgggggcgttagatccgctggcaacaggaatgttgccgatttgtttggga
gaagccactaagttttctcaatttttattggatgcggataagcgttatttagttactgca
aaattaggcgagcgcactgatacttccgatgctgacgggcaggtagtggaaacccgtgca
gtgaatgtggaaacaccgcaaattttgaccgcacttgagcaatttcggggcgatattttg
caagtgccgacgatgttttcagccttaaaacatcaaggcaaacctttgtatgaatacgcc
cgtcaaggtatcaccgtagaacgtgaggcacgcccgatcacgatctttgaacttaagttt
attgaataccatgcgccttatttaacgttggaagtgcattgttccaaaggtacatatatt
cgcacattggtggatgatttaggggaagtattaggttgtggagcgcatgttaccatgtta
cgccgacttgccgtggcggattatccgattgaagcgatgatgagttggcaagaattacaa
tatcttgcggaaaagcaagagttggcgttacttgatcaacatttattaccaacagacacg
gcagtaagtaaattaccggcattgcatttgaatgaggcacaaagtcgtgccattggtttt
ggtcagcgagtgaaatttactaacgaccagaatttacaaggacaagtgcggttgttttcg
gcacagaatttatttttaggcgtggcgttgatcgatggcgatattatccgtccacaacga
ttaattacacaatccgcataa
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