Rodentibacter caecimuris: FEE42_03440
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Entry
FEE42_03440 CDS
T06473
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00061
Fatty acid biosynthesis
rhey00071
Fatty acid degradation
rhey01100
Metabolic pathways
rhey01212
Fatty acid metabolism
rhey02024
Quorum sensing
rhey04146
Peroxisome
Module
rhey_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FEE42_03440 (fadD)
00071 Fatty acid degradation
FEE42_03440 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FEE42_03440 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FEE42_03440 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhey01004
]
FEE42_03440 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhey04147
]
FEE42_03440 (fadD)
Enzymes [BR:
rhey01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FEE42_03440 (fadD)
Lipid biosynthesis proteins [BR:
rhey01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FEE42_03440 (fadD)
Exosome [BR:
rhey04147
]
Exosomal proteins
Exosomal proteins of breast milk
FEE42_03440 (fadD)
Exosomal proteins of breast cancer cells
FEE42_03440 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF5065
Fve
Polysacc_synt_2
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QIA76479
LinkDB
All DBs
Position
complement(693527..695218)
Genome browser
AA seq
563 aa
AA seq
DB search
MEKIWFQNYPEGTEKHLDTSKYESILDIFNKAIREHPDRPAYINMGQVLTFRKLEERSRA
FAAYLQNEFKLKRGDRVALMMPNLLQYPIALFGILRAGLIAVNVNPLYTPRELEHQLQDS
SAVAIVVVSNFASTLEKVVFNTDIKHVILTRMGDQLSFGKRTLVNFVVKYIKKLVPKYKL
PDAVTFREVLSIGKHRQYIQPEVRRNDLAFLQYTGGTTGVAKGAMLSHGNIITNVFQAKW
IAEPFIGDHARARSAILALPLYHVFALTVNCLLFLELGVTAILITNPRDVDGFVKELKKY
RFEAITGVNTLFNALLNNENFKEVDFSALKLSVGGGMAIQQSVATRWHDLTGCNIIEGYG
MTECSPLIAACPVNVVKHNGTIGVPVPNTDVKIIKDDGSEAKIGEAGELWVKGEQVMQGY
WQRPEATSEVLKDGGWMATGDIVIMDESYSLRIVDRKKDMILVSGFNVYPNEIEDVVMLN
YKVAEAVAIGVPNEISGETIKIFVVKKDESLTRDELRQHCRQHLTGYKVPKEIEFRDELP
KTNVGKILRRILRDEEIANRPTH
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttggtttcaaaattatccggaaggtactgaaaaacatctggatacttcg
aaatatgaatcaattttagatatatttaataaagcgattcgcgaacatcctgatcgaccg
gcatatatcaatatggggcaggttcttacttttcgtaaattagaagagcgtagtcgggct
tttgcagcttatttgcaaaatgaatttaaattaaaacgcggtgatcgtgtagcattaatg
atgccgaatttgttgcaatatcctatcgcactttttggtattttacgggcaggtttaatc
gcagtgaatgttaacccgctttatactccgcgtgaacttgaacatcaattacaagatagc
agtgcggtagcgatagtggttgtttcaaattttgcttcgacgcttgagaaagtcgttttt
aacactgatataaaacacgtcattttaacccgaatgggtgatcaactttcctttggtaag
cgtacattagttaattttgtggtgaaatacatcaaaaaattagtaccaaagtataaatta
cctgatgccgttactttccgtgaagtattaagtattggtaaacatcgtcaatatattcaa
cctgaagtgagacgcaatgatctggctttcctacaatatacggggggaacaaccggtgta
gcgaaaggggcgatgctttcccatggaaacattattaccaatgttttccaagcaaaatgg
atcgcagaacctttcatcggcgatcatgctcgtgcccgatcggctattcttgccttaccg
ctttatcatgtttttgctttaaccgtgaactgtttacttttccttgaacttggtgttacg
gctattttgattacaaatccacgtgatgttgatggttttgtcaaagagttaaaaaaatat
cgctttgaagccattacaggagtgaatacgctatttaatgcactattaaataatgaaaat
ttcaaagaagttgatttttcggcattaaaactttctgttggcggtggtatggctattcag
caatccgttgctactcgttggcacgatttaaccggttgtaacattattgaaggctatggt
atgacggaatgctcacctcttattgccgcttgtccggtaaatgttgtgaaacataacggg
actatcggcgtgcctgtgccaaatacggatgtaaaaattattaaagatgatggttcagag
gcgaaaatcggtgaggcgggagaactatgggtaaaaggcgagcaagtcatgcaaggctac
tggcagcgtcctgaagcaacgagtgaagtattgaaagatggcggctggatggcaaccggc
gatattgtcattatggatgaaagctacagtttacgtattgtggatcgcaaaaaagatatg
atcttagtttccggttttaatgtctatccgaatgaaattgaagatgttgtcatgcttaat
tataaagtagcggaggctgtggcaattggcgtaccgaacgaaatttcaggcgaaaccatt
aaaatttttgtagtaaaaaaagacgaaagtcttacgcgtgatgaactccgtcagcattgc
cgtcagcatttgaccggctacaaagtgccgaaagaaattgagtttcgagatgaattacct
aaaacaaatgttggaaaaatattacgccgaatattacgagatgaagaaattgctaaccga
ccaacacactaa
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