KEGG   Rodentibacter caecimuris: FEE42_03625
Entry
FEE42_03625       CDS       T06473                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
rhey  Rodentibacter caecimuris
Brite
KEGG Orthology (KO) [BR:rhey00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhey02044]
    FEE42_03625 (tssC)
Secretion system [BR:rhey02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FEE42_03625 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QIA76506
LinkDB
Position
complement(742754..744241)
AA seq 495 aa
MVANNQTAGAEKKVQTTSLLDQVMEQTRFKPENDDYSIAQRGIAEFISEMLKSYSKDTVV
NKTLIDEMIVRLDEKISHQVDEILHNEKFQEMESAWRGLKLLVDRTDFRENIKIEVLNVS
KEELLDDFEYATDITQSGLYKHVYSANYGQFGGEPVAAIVGNYMFTPSAPDMKLLQYVSS
VGAISHAPFISAAGPEFFGLDSYAALSEIKEIKDIFEGPRYAKWRSLRESEDSKYLALTM
PRFLSRLPYDPVENPVRTFNYYESIDGKHENYLWSNVAFLMASKVTDSFAKYRWCPNIIG
PQSGGAVDDLPLHLFESFGHLQAKIPTEVLITDRKEFELADEGFIPLTMRKGSDNAAFFS
ANSVQKPKKFPNTEEGKAAETNYKLGTQLPYMFIVNRLAHYLKVLQREQIGSWKERQDLE
RELNVWLKQYVSDQENPPADVRSRRPLRSAKVEVSSVAGEPGWYKVSLSVRPHFKYMGAS
FDLSLVGRLDIDNSK
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggttgctaataatcaaacagcaggcgctgagaaaaaagttcaaacaacaagtttgctt
gatcaagttatggagcaaactcgtttcaaaccggaaaacgatgattatagtattgcacaa
cgcggtattgcggaatttatttctgaaatgttgaaatcgtacagtaaagacactgttgta
aataaaacattaattgatgaaatgattgttcgacttgatgagaaaatcagtcatcaggtt
gatgaaattctgcataatgaaaaatttcaagaaatggaatctgcgtggcgcggtttaaaa
ttacttgttgatcgtaccgatttccgtgaaaacatcaaaattgaagtgctaaacgttagc
aaagaagaattacttgatgattttgaatatgcaacagatatcacgcaaagtggtctttat
aagcacgtttattctgctaattacggacaatttggtggcgagcctgttgctgccattgta
ggtaactatatgtttacgccgtctgcgccggatatgaagttattacaatatgtttcttcg
gttggtgcgatatctcatgcgccgtttatttctgccgcaggccctgaattttttggctta
gacagttatgccgcgttatctgaaattaaagaaatcaaggatatttttgaagggccgcgt
tatgcgaaatggcgttctttaagagagtctgaagattctaaatatctggcgttaactatg
ccgcgtttcttatcgcgcttaccttatgatccggttgaaaatccggttagaacctttaat
tactatgaaagcattgatggtaaacacgagaattatttgtggagtaatgttgcgttcttg
atggcttcaaaagtaactgatagttttgcgaaatatcgttggtgtccaaatattattggt
ccgcaaagcggcggtgcggttgatgatttaccattgcatttgtttgaatcatttgggcac
ttgcaagcaaaaattccaacagaagtgttaatcaccgatcgtaaagagtttgaattggct
gatgaaggctttattcctttaacaatgcgtaaaggaagtgataatgcagcattcttttcg
gcaaactctgtgcaaaaaccgaaaaaattcccaaatactgaggaaggaaaagccgctgaa
accaattataagctgggtacgcaattaccatatatgtttattgtgaatcgcttggctcat
tatttgaaagtgttacagcgtgagcaaatcggttcgtggaaagagcgtcaagatcttgaa
cgtgaattaaatgtatggttgaaacaatatgtttctgaccaagaaaacccaccggcagat
gttcgtagccgtcgtcctttacgttctgcaaaagtagaagtatctagtgtggcgggtgag
ccgggttggtataaagtttctttatctgttagaccgcactttaaatatatgggcgcaagt
tttgatctttctcttgttggccgtttggacattgataacagtaagtag

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