Rodentibacter caecimuris: FEE42_03675
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Entry
FEE42_03675 CDS
T06473
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FEE42_03675 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhey03400
]
FEE42_03675 (xseA)
Enzymes [BR:
rhey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FEE42_03675 (xseA)
DNA repair and recombination proteins [BR:
rhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FEE42_03675 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
DinI
Motif
Other DBs
NCBI-ProteinID:
QIA76514
UniProt:
A0A858BB57
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All DBs
Position
complement(765649..766968)
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AA seq
439 aa
AA seq
DB search
MSDNIYSVSQLNNATRQMLESNFSQIWLTGEISNFTQPVSGHWYLTLKDENAQVRCAMFR
MKNSRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIESMHSAGEGLLQQQFEALKMKLAAE
GLFAQNLKKNLPHFSKSVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATAE
IVQMIELANVRREVDVLIVGRGGGSLEDLWCFNEESVARAIFRSTLPIISAVGHETDVTI
ADFVADLRAPTPSAAAELVSRNQGELLQQLRHQQQRLDIALDRLLTEKSQYLKQLTLRLQ
NQHPQNQLRVQQAKNEQLVQRLQFAMKRQVEKTQQKLTALSLRLAQNPLPYRIQRYQQQL
VQLQGRLHFSTSHQLIERQNRLASLCGKLDGLSPLKVLARGYSIATTEQGKTITSMNDVK
QGEMITTKVADGNIVSQVV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaatatttattccgtctcccaactcaataatgcgacacgccaaatgttggaa
agtaatttttcacaaatttggctgacaggggaaatttctaattttacccagccggtatca
ggtcattggtatctcacattgaaagatgaaaatgcacaggtgcgttgtgcgatgtttagg
atgaaaaattcgcgtgtggcgtttcgtccgcaaaatgggatgcaagtcttggtgcgtgct
aatgtgagtttatatgagccgcggggtgattatcaactcatcattgaatccatgcattct
gcgggtgaaggattgttacaacagcaatttgaagccttgaagatgaagctggcggcagaa
ggattatttgctcaaaatctcaagaaaaatttaccgcactttagtaaatccgtgggaatt
atcacttcatctaccggtgcggctttgcaagatattttgcatattttggcacggcgggat
ccaagtttgaaggtagtgatttatcccacagccgtgcaaggcaaagaggcaacggctgag
attgtgcagatgatcgaactggcaaatgtacggcgagaagtggacgtgctgattgtcggg
cggggcggcggttcgttagaagatctttggtgttttaatgaggaatctgttgcacgtgcg
atttttcgctccacgttaccgattatcagtgccgtaggtcatgaaacggatgtcactatt
gccgattttgttgctgatcttcgtgcgccgactccctcggcggcggcagaattggtcagc
cgaaatcaaggggagttactgcaacaactccgccatcagcaacagcgtttagatatcgcg
cttgaccgattattaacagaaaaaagccagtatttaaagcaactaacattgcgtttacaa
aatcaacatccgcagaatcaactgcgtgttcaacaggcaaaaaatgagcaacttgtccaa
cgtttacaatttgcgatgaaacgtcaggttgaaaaaacacagcaaaaattgaccgcgctt
tcccttcgtttggcacaaaatcccttaccttatcgtatccaacgttatcaacaacaatta
gtgcaattacaagggcgattacatttcagcacaagtcaccaattgatagaacgtcaaaat
cggcttgcgtcattgtgtggaaaattagatggattaagtccgttgaaggttttggctcgc
ggttattccattgcgacaacagagcaaggaaaaacaatcacgagtatgaatgacgttaaa
caaggggaaatgattaccacaaaagtggcggatgggaatatcgttagtcaggtggtatga
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