KEGG   Rodentibacter caecimuris: FEE42_03785
Entry
FEE42_03785       CDS       T06473                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rhey  Rodentibacter caecimuris
Pathway
rhey02024  Quorum sensing
rhey03060  Protein export
rhey03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhey00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FEE42_03785
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FEE42_03785
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FEE42_03785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhey02044]
    FEE42_03785
Enzymes [BR:rhey01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FEE42_03785
Secretion system [BR:rhey02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FEE42_03785
  Eukaryotic Sec-SRP protein
   FEE42_03785
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 AAA_30 AAA_31 cobW AAA_33 AAA_24 T2SSE YqeC AAA_16 AAA_14 APS_kinase AIP3 AAA_28 KTI12 Rad17 ABC_tran TsaE ATP_bind_1 Fe-ADH_2 AAA_19 Helicase_RecD Thymidylate_kin
Other DBs
NCBI-ProteinID: QIA76531
LinkDB
Position
788731..790119
AA seq 462 aa
MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVALPVVREFIAKVKESAV
GEEVNKSLTPGQEFLKIVQRELEKAMGESNESLNLATQPPAVILMAGLQGAGKTTSVGKL
AKFLRERHKKKVLVVSADVYRPAAIKQLETLAQSVGVDFYPSDVKQNPIDIAKAALAEAK
LKFYDVLIVDTAGRLHVDGEMMDEIKQIHSALNPIETLFTVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTEALEPFHPDRVASRILGMGDV
LSLIEDLERSVDREKAEKMAQKFKKGDSFTLDDFREQLIEMKKMGGMMSMLEKLPGAKNL
PDHVKNQVDDKMFIKMEAIINSMTLKERANPDIIKGSRRRRIALGSGTQVQDVNKLLKQF
DEMQRMMKKMRKGGMAKMMRGMQGLMGGGLGGLGGLGGMFKR
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgtttgagaatttatctgatcgcctttctaaaaccctacgtaatatcacggggaaaggt
cgtttaacggaagataatattaaagataccctacgtgaagtacgtatggcattgctggaa
gcggatgtggcattgcctgtcgttcgtgaatttatcgctaaagtgaaagaaagtgccgtt
ggggaagaggttaataaaagtttaacaccgggacaagaattcttaaaaatcgttcaacga
gagcttgaaaaagccatgggcgaatcaaacgagagtctgaatctggcaacccaaccaccg
gcggtgattttaatggcgggtttacaaggggcggggaaaaccaccagtgtcggaaaactg
gcaaaatttttgcgcgaacgccataagaagaaagtgttggttgtctctgccgacgtatat
cgccctgcggcaattaagcaattggaaaccttggcacaatctgtaggcgtggatttctac
ccttctgatgttaaacaaaatccgatcgatattgccaaagccgctcttgcggaagcaaaa
ctcaaattctacgacgtactcatcgtggataccgcaggtcgcttgcacgtggatggcgaa
atgatggatgaaatcaaacaaatccacagtgcattaaatcctattgaaacgctctttacc
gttgatgcgatgacgggtcaagatgcggcaaatactgcgaaagcttttaatgaggcattg
ccgcttaccggtgtcattcttactaaagtagatggcgatgctcgtggtggcgcggcgttg
tctattcgtcaaatcaccggtaaaccgatcaaattcctcggagtgggagaaaaaaccgag
gcgcttgagccgttccaccctgatcgtgttgcttctcgtattttaggcatgggcgatgtg
ctttctctgatcgaagatcttgaacgttcggtagatcgcgaaaaagcggaaaaaatggca
caaaaattcaagaaaggcgatagctttactcttgatgatttccgtgaacaattgatcgaa
atgaaaaaaatgggcggaatgatgtcgatgttggaaaagctccccggggcaaaaaattta
ccggatcacgtcaaaaaccaagtggacgataaaatgttcattaaaatggaagccattatt
aactctatgacgctaaaagaacgcgctaatcctgacattatcaaaggttcccgccgtcgc
cgcattgccttaggttccggcacgcaagtgcaagacgtgaataaattgctcaaacaattt
gatgaaatgcagcgaatgatgaaaaaaatgcgtaaaggcggtatggcaaaaatgatgcgg
ggcatgcaagggctcatgggcggcggcttaggcggtcttggtggtctgggcggtatgttt
aaacgttaa

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