Rodentibacter caecimuris: FEE42_04225
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Entry
FEE42_04225 CDS
T06473
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FEE42_04225 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhey03400
]
FEE42_04225 (ruvA)
DNA repair and recombination proteins [BR:
rhey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEE42_04225 (ruvA)
RecFOR pathway proteins
FEE42_04225 (ruvA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_8
Transposase_20
IMS_HHH
5_3_exonuc
CAMSAP_CKK
Motif
Other DBs
NCBI-ProteinID:
QIA76617
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All DBs
Position
complement(866311..866925)
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AA seq
204 aa
AA seq
DB search
MIGRLTGILLEKQPPEILIDVQGVGYELLLPMTSFYDLPELGQETTLFTHLAIREDAHLL
FGFAQKTDRTLFRELIKTNGVGPKLALAILSAMSVEQFAYAIEHEELSKLVKIPGVGKKT
AERLLVELKGKFKGVKQNEFFIESKHISSEPAAISYQENSENEAVSALIALGYKPADAAK
MVKSVIKPELNSEQLIREALKAAL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgattggtcgtttaacaggtattctattagaaaaacaacctcctgaaattttaattgat
gtgcaaggcgttgggtatgagttacttttgccgatgacgagcttttatgacttgcctgag
ctcggacaggaaacaaccttgtttactcatcttgctattcgagaagacgcccatttactt
tttggatttgcacaaaaaactgaccgcactttatttcgtgaattaattaaaaccaatggt
gttggaccaaaattggcactggcaattttatcagcaatgtctgttgagcaatttgcttat
gcaattgaacatgaagagctttccaaactcgttaaaattccgggcgtaggcaaaaaaacc
gcagagcgtctattggttgaattaaaaggaaaatttaaaggtgtgaaacaaaatgaattc
tttatagaaagtaagcatatatctagcgagcctgcggctatttcatatcaagaaaactca
gaaaatgaagccgtttcggcattgatcgcattagggtataaaccagcggatgctgcaaaa
atggttaaaagcgtgataaaaccggaattaaatagcgaacaactaattcgtgaagcctta
aaagcggcgttataa
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