Rodentibacter caecimuris: FEE42_06160
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Entry
FEE42_06160 CDS
T06473
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey03030
DNA replication
rhey03410
Base excision repair
rhey03420
Nucleotide excision repair
rhey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FEE42_06160 (polA)
03410 Base excision repair
FEE42_06160 (polA)
03420 Nucleotide excision repair
FEE42_06160 (polA)
03440 Homologous recombination
FEE42_06160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhey03032
]
FEE42_06160 (polA)
03400 DNA repair and recombination proteins [BR:
rhey03400
]
FEE42_06160 (polA)
Enzymes [BR:
rhey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FEE42_06160 (polA)
DNA replication proteins [BR:
rhey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FEE42_06160 (polA)
DNA repair and recombination proteins [BR:
rhey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FEE42_06160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FEE42_06160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WH_GTF3C1_N
Motif
Other DBs
NCBI-ProteinID:
QIA76963
LinkDB
All DBs
Position
1215885..1218683
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAANPLVLVDGSSYLYRAFHAFPPLTNSAGEPTGAMYGVLNMLKSLISQVQPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEADDVIGT
LARQASHNGKKVLISTGDKDMAQLVDDNIMLINTMNNSLLDRQGVIEKYGIPPELIIDYL
ALMGDSSDNIPGVAGVGEKTALGLLQGLGNMAEIYANLDKVAELPIRGAKKLGEKLIAEK
QNADLSYTLATIKTDVLLNITPDELLLGESDNDRLIEYFGRYEFKRWLNEVMNGSDSITQ
ANDQSVKINPYQATQSIPSGSAVEKLPEIQIDRSRYETLLTSADLERWIDKLSKASLFAL
DTETDSLNYMAANLVGLSFALENGEAAYLPLQLDYLGAPQTLEKTTALSALKPILENANI
KKVGQNIKYDLTILVRNGIDVQGVAFDTMLESYVLDSTGRHNMDDLAKRYLGHQTISFED
IAGKGKNQLTFNQIPLEQAAEYAAEDADVTMKLQQALWQKLQQTPSLVTLFEEMELPLLS
VLSRMERTGVLIDSDALFMQSNEIATRLIALEARAYELAGQTFNLASTKQLQEILFDKLG
LPVLQKTPKGAPSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQMVEPNTGRV
HTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIAREGYSVLAADYSQIELRIMA
HLSQDQGLINAFAQGKDIHRSTAAEIFGVPLNEVTGEQRRNAKAINFGLIYGMSAFGLSR
QLGIPRGDAQKYMDLYFQRYPGVQTFMQDIREKAKAQGYVETLFGRRLYLPDINAANAMR
RKGAERVAINAPMQGTAADIIKRAMIKLDELFRQDPDIDMIMQVHDELVFEVRSEKVEFF
SKLIKQNMETAAELVVPLIVDVGVGKNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatcgcagcaaatccattggtattagtggatggttcttcttacttatatcgc
gcatttcatgcatttccccctttaacgaattccgccggtgagccaaccggtgcaatgtat
ggtgtattaaatatgcttaaaagcctgatttcacaggtgcagcctagccacattgccgtg
gtatttgatgccaaagggaaaaccttccgggatgagctgttcgaacaatacaaatctcat
cgcccgcctatgcccgatgatctcagaaagcaaattcaaccgttacacgatatgatccgc
gcccttggtattccccttttagtggtagagggcgtagaagcggatgatgttatcggcaca
ctcgccagacaagcgtcccacaacggtaaaaaagtgcttatcagcaccggcgataaagat
atggcacaactggtagatgacaatattatgctcatcaataccatgaacaatagcttattg
gaccgccaaggtgtgattgaaaaatacggtattccgccggaactcattattgattacctt
gcactgatgggcgatagctcggataacattccgggggttgccggtgtgggagaaaaaacc
gcactggggcttttacaaggtctcggcaatatggccgaaatttatgccaatcttgataag
gtggctgagttgccgattcgaggggcaaaaaagctcggtgaaaaattgattgccgaaaaa
caaaatgcggatttatcttacacccttgcaacgattaaaaccgatgtgctattaaacata
acgcctgacgaattattgctcggtgaaagtgataatgaccgattgattgaatattttggt
cgctatgaatttaaacgttggttaaatgaagtcatgaacggttcggattccatcacacag
gcaaacgatcaatcggtgaaaataaatccgtatcaagccacacaaagtattccgtcggga
agtgcggttgaaaaattaccggaaattcaaattgatcgcagccgatatgaaaccttactc
acttcagctgatcttgagcgttggattgataagctatcaaaagcctccctatttgcctta
gataccgaaaccgacagtctgaattatatggcggcgaatcttgtcgggctttcttttgcg
cttgagaacggtgaagcggcttaccttccgctacaactggattatctcggtgcgcctcaa
acactcgaaaaaacaaccgcactttctgcactcaaaccgattcttgaaaatgccaacatc
aaaaaagtaggacaaaatatcaaatatgatctcaccattttggtgcgaaatggcattgat
gtgcaaggtgttgcttttgatacgatgttagaatcctatgtgctggacagcaccggtcgt
cacaatatggatgatctcgctaaacgctatttaggacatcagactatcagctttgaagat
attgccggtaaaggtaaaaatcaactgacattcaatcaaattccattggaacaagcggcg
gaatatgccgccgaagatgcagatgtcacgatgaaactccaacaagcactatggcagaaa
ttacagcaaacgccaagtttagtcacactttttgaagaaatggaattgccgttgttaagc
gtactttcccgtatggaacgcaccggcgtattgattgatagtgatgccctgttcatgcaa
tccaatgaaattgccacaagattgatcgcacttgaagcacgcgcttacgaactcgccggg
caaacctttaatctagcatccaccaaacaactacaagaaattttatttgataaactcggt
ttgccagtgctgcaaaaaaccccgaaaggtgccccttctaccaatgaagaagtattggaa
gaattggcatacagtcacgagttgccaaaagtattagtagaacatcgaggcttaagcaaa
ttaaaatcgacctatacggataaattaccacaaatggtagagccgaacacagggcgtgtt
catacttcttaccatcaagcggtaaccgcaacagggcgtttatcctccagtgatccaaat
ttacaaaacattccgatccgtaatgaagaaggtcgccgtattcgtcaagcttttattgcc
cgtgaaggctattccgtcttggctgccgactattcccaaatcgaattgcgcattatggcg
catttatctcaggatcaaggtttgattaatgcctttgcacaaggtaaagatattcaccgt
tccactgctgctgaaatctttggcgtaccattgaatgaagtaaccggtgagcaacgccgc
aatgcaaaagccatcaactttggtttgatttatgggatgtccgcttttgggctttcccgc
caacttggcattccacgtggcgatgcacaaaaatatatggatttatatttccaacgttat
ccgggggtacaaacctttatgcaggatatccgcgagaaagccaaagcacaaggctatgtg
gaaaccctattcggtcgtcgtttatatttgccggatattaatgccgctaacgcaatgcgc
cgaaaaggggcggaacgggttgccatcaatgccccaatgcaaggcacggcagcagatatt
attaaacgtgcgatgattaaacttgacgaactctttcgccaggatcccgatattgatatg
attatgcaagtacatgatgaattagtgtttgaagtgcggtcggaaaaagtcgagtttttt
agcaaactaatcaaacaaaatatggaaaccgccgctgaacttgtcgtacctttgattgta
gatgtcggcgtcgggaaaaactgggatgaagcgcattaa
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