Rodentibacter caecimuris: FEE42_07310
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Entry
FEE42_07310 CDS
T06473
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00300
Lysine biosynthesis
rhey00470
D-Amino acid metabolism
rhey01100
Metabolic pathways
rhey01110
Biosynthesis of secondary metabolites
rhey01120
Microbial metabolism in diverse environments
rhey01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FEE42_07310 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FEE42_07310 (lysA)
Enzymes [BR:
rhey01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FEE42_07310 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIA77183
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Position
complement(1452013..1453260)
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AA seq
415 aa
AA seq
DB search
MNFFQYQNNRLYAEQVPVQKLAEQFGTPLYVYSRATLERHWHAFNEALGSHPHLICFAVK
SCSNIGVLSVMAKLGSGFDIVSQGELERVLAVGGEASKVVFSGVAKSREEIMRALEVGIR
CFNVESVSELNHINLIAGEMGKIAPISLRVNPDVNAHTHPYISTGLKENKFGIGVDEARE
VYRLAASLPNVKISGMDCHIGSQLTELQPFLDATDRLIVLMEQLKQDGIALKHLDLGGGL
GVTYTNETPPHPSEYAKALLEKLKDYQDLEIILEPGRAITANAGILVAKVQYLKSNESRN
FAITDTGMNDMIRPALYEAYMNIVEIDRTLVREKAVYDVVGPVCETSDFLGKQRELAIAE
GDYIAQCSAGAYGASMSSNYNSRPRTAEVLVDGDKAHLIRRRESLQELWALESVI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttccaatatcaaaataatcgactctacgccgagcaagtgccggtacaaaaa
cttgccgaacagttcggtacgccgctttatgtctattcccgtgcgacattggaacgtcat
tggcatgcgtttaatgaggcgttaggttcacatccccatttaatttgttttgcggtgaaa
tcctgttccaatattggtgtactaagtgtaatggcgaaattaggttcaggttttgatatt
gtctcgcaaggcgaattggaacgtgtgctggctgtcggtggtgaggcatcgaaagtcgtc
ttttccggtgtggcaaaatcccgtgaagaaattatgcgtgcattagaagtcggcatccgt
tgctttaatgttgagtcggtttccgaacttaaccacatcaacctcattgccggagaaatg
ggtaaaattgcccctatttccttgcgtgtgaatccggatgtgaatgcccatactcaccct
tatatttccaccggattaaaagaaaacaaatttgggataggcgtcgatgaagcacgcgaa
gtgtatcgattggcggcaagtttgccgaatgtcaaaattagcggaatggattgtcatatc
ggttctcaacttaccgaattgcaaccgtttttggacgcgacagatcgtctaattgtgtta
atggaacaactcaaacaagatggcattgctttgaaacatttagacttaggcggcggttta
ggggtgacttataccaatgaaaccccacctcatcccagcgagtatgccaaagccttattg
gaaaaattaaaagattatcaggatcttgaaattattcttgaaccgggacgggcaatcacc
gccaatgcaggcattttggtggcaaaagtccagtatttgaaaagtaacgaaagccgcaat
tttgccattacagataccggtatgaacgatatgattcgtcctgcattgtatgaggcttat
atgaatattgtggaaattgaccgcactttagtacgtgaaaaagcggtttacgatgtggtc
gggccggtgtgcgaaacctcggattttttaggcaaacagcgagaacttgccattgccgag
ggggattatatcgcacaatgttctgccggcgcttatggggcgagtatgtcttccaactac
aattcccgcccgcgtactgccgaagtgttagtggatggcgacaaagcgcatttaatccgc
cgacgtgaaagtttgcaagaactttgggcgttggaatccgtcatttaa
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