Rodentibacter caecimuris: FEE42_07450
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Entry
FEE42_07450 CDS
T06473
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00541
Biosynthesis of various nucleotide sugars
rhey01100
Metabolic pathways
rhey01250
Biosynthesis of nucleotide sugars
Module
rhey_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FEE42_07450 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
FEE42_07450 (rfaD)
Enzymes [BR:
rhey01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FEE42_07450 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
Core region
FEE42_07450 (rfaD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
QIA77209
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All DBs
Position
complement(1483537..1484466)
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AA seq
309 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNEIGRKDILVVDNLKDGTKFINLVDLDIADYCDKEDFIASI
IAGDDFGAIDAVFHEGACSATTEWDGKYLMQNNYEYSKELLHYCLDRRIPFFYASSAATY
GGRIDNFIEKREFESPLNAYGYSKFLFDEYVRKILPTAESPVCGFKYFNVYGPREQHKGS
MASVAFHLNNQMLKGENPKLFAGSETFLRDFVYVEDVAKVNIWAWQNRISGIYNLGTGNA
ESFQAVAEAVIAFHGKGQIETILFPEHLKSRYQTFTQADLTALRTAGYTGEFKSVAEGTA
TYMAWLNKK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggcggtgccggcatgattggcagcaacattgttaaagcattaaat
gaaatagggcgtaaagatattttggtcgtcgataacttaaaagatggaactaaatttatt
aatttagtggatttggatattgccgattattgcgacaaagaagattttatcgcttccatt
attgccggtgatgattttggcgctattgatgccgtattccacgaaggagcgtgttctgcc
actaccgaatgggacggcaaatatttaatgcagaataattatgaatattctaaagaattg
ctgcattactgcttagatcgccgaattccgtttttctatgcttcaagtgcggcgacttac
ggtggacgaatcgataattttattgaaaaacgggagtttgaaagtccgcttaatgcctat
ggctactcaaaatttttatttgatgaatatgtgagaaaaattttacccacggcagaatcg
ccggtttgcggtttcaaatatttcaatgtttatggcccgagagagcaacacaaaggctcg
atggcaagtgtggcattccatttaaataatcaaatgctgaaaggagaaaatccaaaatta
tttgccggatcggaaacgtttctccgtgattttgtttatgtggaagatgtcgcgaaagtc
aatatttgggcgtggcaaaatcgtatttccggcatttacaatctcggtaccggcaatgcg
gaatccttccaagctgttgcggaagcggtgattgcattccatggtaaggggcaaatcgaa
acgattcttttccctgaacatttgaaatcccgctatcaaacctttacccaagcggattta
accgcattacgcacggccggttatacaggcgaatttaaatccgttgccgaaggtacggca
acatatatggcgtggctcaataaaaagtaa
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