Rodentibacter caecimuris: FEE42_08340
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Entry
FEE42_08340 CDS
T06473
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rhey
Rodentibacter caecimuris
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhey03000
]
FEE42_08340
Transcription factors [BR:
rhey03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FEE42_08340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
PF0610-like_N
HTH_38
HTH_31
HTH_3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QIA77358
LinkDB
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Position
complement(1684710..1685726)
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AA seq
338 aa
AA seq
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MATMKDIARLAKVSTSTVSHVINGSRFVSDEIREKVMSVVAELNYTPSAVARSLKVRETK
TIGLLVTATNNPFFAEVMAGVEQYCQQHQYNLIIATTGGDAGRLQQNLRTLLHKQVDGLL
FMCGDSRFNADTELTVSVPLVVMDWWFTELNADKILENSELGGYLATKTLIDAGHQQIAI
ITGNLKKSVAQNRLKGYKKALMESKIPLNPHWIVESHFDFAGGAAGMQKLLTTPHRPTAV
FCCSDAIAVGAYQVLQQQGLRIPDDISVIGYDDIELSRYLSPPLSTISQPKAELGKLAVE
LLLQRIKNPNEPYQTLTLSPTLQLRKSIKNISDKAQFI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatgaaagatattgcccgattggcaaaggtttcgacttcgacggtttctcac
gtcattaacggttcacgctttgtcagcgatgaaattcgagaaaaagtaatgagcgtggta
gcagaactgaattacacgccatccgctgtggcgcgtagtctgaaagtacgcgaaacaaaa
accatcgggttgcttgttaccgcaaccaataatcctttctttgccgaagtcatggcaggc
gtagagcaatattgccagcagcatcagtataatctcattattgccaccaccggaggtgat
gccggacgattacaacaaaatttacggacactacttcataaacaggtggacggcttatta
tttatgtgtggcgacagccgttttaatgcggatacggaactgaccgtttcagtgccattg
gtggtaatggattggtggtttaccgaattaaacgccgacaaaattctcgaaaactcggaa
cttggcggatatttagcaactaagacgttgattgatgccggtcatcaacaaattgccatt
atcaccggcaatctaaaaaagtctgttgcacaaaatcgcttaaaaggttacaaaaaagcc
ttaatggagtcgaaaatcccactcaatccccattggattgtggaaagccatttcgatttt
gcaggcggtgccgccggtatgcaaaaattgcttacaacaccacatcgcccaaccgccgta
ttttgttgcagcgatgccattgcggttggtgcttatcaagtgcttcaacaacaggggtta
cgtattccggatgatatttccgtcattggctacgatgacatcgaactttcccgttatctt
tctccccctctttctaccatcagtcagcctaaagccgaattaggcaaactcgccgtagaa
ttattactgcaacggataaaaaacccgaatgagccttatcaaacactcaccctcagccct
accctacaattacgaaaatcgattaaaaatataagtgataaagctcaatttatttaa
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