Rodentibacter caecimuris: FEE42_09380
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Entry
FEE42_09380 CDS
T06473
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey00540
Lipopolysaccharide biosynthesis
rhey01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FEE42_09380
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
FEE42_09380
Enzymes [BR:
rhey01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
FEE42_09380
Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
Core region
FEE42_09380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
QIA77538
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All DBs
Position
1901092..1902348
Genome browser
AA seq
418 aa
AA seq
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MQISKQNILPFLANLSISFFFLSVLTLKGGHNIAPIFLMLLGLGYGIYGLIKKFKWDLSK
EDKWLIYSYIFYFTVFVLSLLMNEGKGRELDNPSRAILLIPAFIFLLRTPLKLCALIYAI
PLGSVIAGFVALYDKFILHSPMAYAPRTMQIQGGDIAMSLGLFSFVIGLYFWQKSHKKIA
ALCIIASFGGVLGSILSTARGGWVALPVMLMVVLWIYRRSLSKRFFLSLIGMFAVVVVGV
SQMPNSRVMERLSLIQYDIVRYEKNNANTSLGLRFEMWKSAVGMIKEKPVLGWGEQGATE
KRKQDVETKVVAGHIGQFTHAHNQYLDDFSKRGIVGLIAFLAILFVPLFQFKRRLNSTSS
ETKLIAALGVVHILSVMIYCLSQGFFAHNSGNIFYLFLTTVFYVMLKQSEKRQSLERV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttcaaaacagaatattctccctttcttggcaaatttaagtattagctttttc
tttttatccgtgttgactttgaaaggcggacataatatcgccccgatttttttaatgctg
ctaggtttaggttacggcatttacggtctgatcaaaaaattcaaatgggatttatcaaaa
gaagataaatggcttatttatagttatattttttattttacggtatttgtgctttcgtta
ttaatgaatgaagggaagggaagggaattagataatccgagccgtgctattttattaatt
ccggcgttcattttcttattaagaaccccattaaagttatgtgcattgatttatgctatt
ccattaggatcggtaatcgcgggattcgttgctctttatgataagtttattttacacagt
cctatggcatatgctcctcgaaccatgcagattcagggcggggatattgcaatgtcattg
gggctgtttagttttgtgattgggctttatttttggcaaaaatcacataaaaaaatcgcc
gcactttgtattattgcttcatttggtggcgtattaggcagtattctttctacggctcgt
ggaggctgggtagcgttacccgttatgttgatggtcgtattgtggatttatcgccgttcg
ctgtcaaaaagattttttctgagtttgattggtatgtttgccgtagttgtagtcggtgtt
agccaaatgccgaatagccgtgtgatggagcgtctttcattaattcaatacgacattgtc
agatatgaaaaaaataatgcgaatacctcgcttggattacgctttgaaatgtggaaaagt
gcggttggaatgataaaagaaaaaccggttttaggctggggagagcaaggggcgacagaa
aagcgtaaacaggatgtcgaaacgaaagtagtagccggtcatatcgggcaatttacccat
gcgcataatcaatatctcgatgatttttctaagcgaggaatcgtcggactgatcgcattt
ttagccattttatttgtaccgttatttcaatttaaacgtcgtttaaacagcacttcttca
gaaacaaaattaattgccgcattaggagtggtgcatattttatcggttatgatttattgt
ttgagccaaggtttttttgcgcataattccggtaatatcttctatcttttcttaacaaca
gtgttttatgtcatgttaaaacaaagtgaaaaaagacaatctttggagcgagtataa
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