Rodentibacter caecimuris: FEE42_09635
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Entry
FEE42_09635 CDS
T06473
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FEE42_09635 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhey03400
]
FEE42_09635 (priA)
Enzymes [BR:
rhey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FEE42_09635 (priA)
DNA repair and recombination proteins [BR:
rhey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEE42_09635 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
Zn_ribbon_6
AAA_19
ADDB_N
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QIA77583
LinkDB
All DBs
Position
1954908..1957100
Genome browser
AA seq
730 aa
AA seq
DB search
MKIVRVALAVPLPRLFDYLAPDDTTLVVGVRVLVPFGRQKRVAIVVMFPTESDVAEDKLK
KIIAPLDRESLFSSVTLDWLYWAANYYQVPVGEVLFQALPVKLRNGENVAKNDRTFWCIT
EEGKNALLNGELKRSKKQTEALQCLLENDLEKGNNDFTPTVWSALKSKNFVQAILVQQEQ
KSWQTVLHDKPLVNVNNRLTLNKQQALAFSQLMFQREFNVWLLEGVTGSGKTEIYLQYIE
EILKSGKQVLVLVPEIGLTPQTVQRFNARFNVEIDVLHSHLNDTQRLNVWARARTGQSAV
VIGTRSALFTQFANLGAIILDEEHDASFKQQDGWRYHTRDLAIVLAQKLAIPVLMGSATP
SLESINNVQNGKYKHLTLPKRAGNATALRQFVIDLKNQRVQNGLSKPLLERMKHHLERGN
QVLLFLNRRGFAPVLLCHECGWIAQCPHCEKPYTYHQYQRALRCHHCGSQKTIPRQCDHC
GSTHLVTTGLGTEQLEETLKAQFPDYSVARIDRDSTARKGKLERYLADIQQGKSQILVGT
QMLAKGHHFPNVTLVALVNVDSALFSLDFRAEERLAQLYIQVAGRSGRAEKQGEVVLQTH
YPDHPLLTTLLAKGYQAFAEETLRLRHSMGLPPFSFQALFKAQARYSEQAEQCLMQIADF
FRSQNVEGLHILGPMPAPFGKKSGQFRWQLLLQHASRMVLQKVLHDYQQTNLERNNQIRL
TLDVDPQDLS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgttcgagttgcacttgccgtgccgcttccccgtttatttgattatcttgca
ccggacgacacaacattagttgtgggggtacgtgtgctggttccttttggaagacaaaaa
cgggttgcgatagttgtgatgtttcctaccgaatccgatgtggcggaggataaactaaag
aaaatcattgcgcctttggatagggagtctttattttcttcggtgacattggattggctg
tactgggcggcaaattactatcaagtgccggtgggtgaagtattatttcaagccttgccg
gtgaagttacgcaacggtgaaaatgtggcgaaaaatgaccgcactttttggtgtatcacg
gaggagggaaaaaatgcgctgttgaacggtgaattaaagcgttccaaaaagcagactgaa
gctctgcaatgcttgttggaaaatgatttggaaaaaggaaataatgattttactccgacc
gtttggtcagccttaaaaagtaaaaactttgtccaagcgatccttgttcaacaagaacaa
aaaagttggcaaaccgttttgcatgataagccgttagtgaatgttaataatcgtcttact
ttaaataaacagcaagccttagcttttagccaattaatgtttcaacgtgagtttaacgtc
tggttgttggagggagtgacaggttccggtaagacggaaatttatctgcaatatatcgag
gaaatattgaaatccggtaaacaagtgcttgtgctcgtaccggaaatcggtttgacgcct
caaaccgtgcagcgttttaacgcgcgttttaatgtggaaattgatgttttgcattctcat
ttgaacgatacccaacggttgaatgtgtgggcgcgtgcgagaacggggcaaagtgccgta
gtaatcggcacaagatcggcattatttacacaatttgctaatctgggagcgattatttta
gacgaagaacatgatgcttcttttaaacaacaagacggttggcgttatcatacccgtgat
ttagccattgtgctggcacaaaaattagcgattcccgtactgatggggtcggcgacaccc
agtttagaaagtattaataatgtacaaaatggtaaatataaacatttgacgttgccaaaa
agagcgggaaatgcgaccgcacttcgccagtttgtgatcgatttaaaaaatcaacgcgtc
caaaatggcttgtccaaaccacttctagaacgaatgaaacatcaccttgaaagaggcaat
caggtcttgttatttctaaatcgtcgcggatttgcaccagttttactctgccatgaatgc
ggttggattgcacaatgtccgcattgtgaaaagccttatacctatcatcaatatcagcga
gccttgcgttgccaccattgcggctcgcaaaagaccattccccgtcaatgtgatcattgt
ggttctacccatcttgttacaaccggacttggtacggagcaattagaggaaacgttaaaa
gcgcaatttcctgattattctgtggcaagaattgatcgcgacagcacagcccgtaaaggc
aaattggaacgctatttggcagatattcaacagggaaaaagccaaattttggttggcacg
caaatgttggcaaaagggcatcattttccgaatgtaacattggtagcactggtaaatgtg
gatagtgcattattttccttagattttcgagcggaggaacgattagcacaactttatata
caagtagcggggcgttccggacgtgcggaaaaacaaggtgaagtggtactgcaaacccat
tatcctgatcatccgttattgacaacgttattagcaaaaggctatcaggcttttgccgaa
gaaaccttgcgtttacgccactcaatggggttaccgccttttagtttccaagcattgttt
aaagctcaggcgcgttattcggagcaagcggaacagtgtttaatgcaaattgcggatttt
tttcgctcacagaatgtcgaaggattacatattttaggccctatgccggcgccattcggt
aaaaaatcgggacaattccgttggcagctgcttttgcaacacgcctcccgtatggtgttg
caaaaagttttacatgattatcagcaaacaaatttagaaagaaataatcaaatacggttg
actttagatgttgatccgcaggatttaagctag
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