Rodentibacter caecimuris: FEE42_11035
Help
Entry
FEE42_11035 CDS
T06473
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rhey
Rodentibacter caecimuris
Pathway
rhey02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FEE42_11035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhey02000
]
FEE42_11035
02044 Secretion system [BR:
rhey02044
]
FEE42_11035
Transporters [BR:
rhey02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FEE42_11035
Secretion system [BR:
rhey02044
]
Type I secretion system
Adhesin protein transporter
FEE42_11035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
7tm_7
Zeta_toxin
G-alpha
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIA77828
LinkDB
All DBs
Position
2240390..2242615
Genome browser
AA seq
741 aa
AA seq
DB search
MKSIIEHLALVTQLHGNPVAQEALTAQVVRDRDLNINFASLSEVLRTYGFDNRVSERKLE
DIPSLAVPVMAILHNEEALVITKIAGSGRMREFTVRQSDAVEKVLSYEELSRLYLGYCWF
VKPKVVSDIRSELPEYHMPKAWFWKVIWRFKAYYGQVVLATFIINFLALVSSLYVMNVYD
RVIPNKTYETLWALSIGVVLAISFEFMAKMIRGHLTDIAGKKADLIISAALFRRVMALRL
IDKPASSGSYANNLRDFESVREFMTSASLLVLVDLPFLLLFVFVIYLVGGKLALVPFVII
PTVIIVGIAVQPKLAAKINESMREGSQRQGLIVEALDGIETLKANNATNWAQQRWDMYTA
KTSASQIKVKDLSNFVVNFSVALQQLNTVFLVILGTYLIHSQDEASRITMGALIASVILS
GRALAPLSQIAGLATRFQQARLALKGVDDIINRPIERDAQRKYITLKQVQGKLNFNNVNF
QYNKESANALNKVNITIQPGEKVAILGRVGSGKSTLLKLASGLYEPQSGGVTLDNVDLRQ
IDPNYVRNQISLLGQAPRLFLGTLRENLDIARTDNFSSDQELVNALRRFGLETLVNSHPR
GLDMPLGENGQGLSGGQKQLVALARLTIKDPQVVLLDEPTSDLDQGSEEMVLQALGHWVR
NRTMVVVTHRMQVLKLVSRVIVMENGKVVIDGPRDAVLAHLQKNEQPKTLNRNQSTEHTE
QENGSSEKVNGQATEQGTENA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctattattgaacatttggcattggtcacgcaattgcatggtaatcccgttgcg
caggaagccttaacagcacaggttgtacgggatcgggatttaaacattaatttcgcttca
ttaagcgaagtgttaagaacttacgggtttgataaccgagtttccgaacgcaaactggaa
gatataccaagccttgccgtaccagtgatggctattttgcataatgaagaagcattggtg
attaccaaaattgccggtagtggcagaatgcgtgagtttactgtgcgtcaatccgatgcg
gtggaaaaggtgttgagctacgaggaattaagccgactttatttaggctattgttggttt
gtaaagcctaaagtcgtgtctgatattcgttccgaactgccggaataccatatgccgaaa
gcctggttttggaaagtaatttggcgttttaaagcctattacggtcaagttgtgttggcg
acttttattattaatttcctggcgttggttagttcgttatacgtgatgaatgtgtatgat
cgggttattccgaataaaacctatgagaccttatgggcattgagtattggggttgtgctt
gccattagttttgaatttatggcaaaaatgattaggggacatttaaccgatattgccggt
aaaaaagccgatttgattattagtgcggcattatttagacgagtgatggcattacgtctg
attgataaaccggcttcctcgggatcctatgcgaataacctacgggattttgaatcggtg
cgtgagtttatgacgagcgccagtttgttagtattggtcgatttaccgttcttactgtta
tttgttttcgtcatttatttggtcggtgggaaattggcgcttgtgccatttgtgattatt
ccgaccgttattattgtcggtattgccgtacaaccgaaattagcggcaaaaattaatgaa
tccatgcgggagggatcacaacgtcaaggactgattgttgaagcattggacggaatcgaa
accttaaaagccaataatgcgaccaattgggcgcaacaacgctgggatatgtacacggca
aaaacctcggcatcgcagataaaagtgaaagatttaagtaactttgtagtgaatttctcg
gttgctttgcagcagttgaatacggtgtttttggtaattttagggacatatttaattcat
agtcaggacgaagccagccgtattactatgggggcattaatcgcatcagtgattttatcc
ggccgggctttggctccattatcacaaatcgccggtcttgctactcgctttcagcaggcg
cgtttagccttaaaaggtgttgatgatattatcaatcgcccgattgagcgtgatgcacaa
cggaaatatatcaccttaaaacaggtacaaggcaaactgaattttaacaatgtcaatttc
caatacaataaagaaagtgccaatgcgctgaacaaagtgaatattacgattcagcccggt
gaaaaagtagctattttagggcgggtcggtagcggtaagagtaccttgttaaagttagca
tcggggctttatgaaccgcaaagcggcggagttacgttagataatgtggatcttcgccaa
attgatccgaattatgtgcgtaatcagatttcattgttggggcaggctccccgtttattt
ttaggaacattgcgtgagaatctggatattgcccgtacggataatttctccagtgatcag
gaactggtcaacgcattacgccgtttcggtttagaaaccttggttaacagccatccacgc
ggattggatatgcctctgggtgaaaacggtcagggcttgtcaggcgggcaaaaacagttg
gtggcattagcccgtttaaccattaaagatccgcaagttgttttgttggatgaaccgacc
agcgatttggatcagggatcggaagaaatggtattgcaggctttggggcactgggtgcgt
aatcgaacaatggttgttgtaacacatcgcatgcaagtgttgaaactagtgagtcgtgtg
attgtaatggaaaacggaaaagtcgtgatcgatggcccacgggatgccgtcttggcacat
ttacagaaaaatgaacagccaaaaacgctaaatcggaaccaaagtactgaacataccgaa
caggaaaacggttcctcggaaaaagtaaacgggcaagcgactgaacagggaacagaaaat
gcataa
DBGET
integrated database retrieval system
